RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CMTM5Q96DZ9 223 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 STN1Q9H668 368 aaKnown RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 RSAD1Q9HA92 442 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 PRDM15P57071 1507 aaPredicted RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 H7C4K7 107 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 CARSP49589 748 aaKnown RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 ATP6V0D2Q8N8Y2 350 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 TRIM9Q9C026 710 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 ALG13Q9NP73 1137 aaKnown RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 MRFAP1Q9Y605 127 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 RAD23BP54727 409 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 CHSY1Q86X52 802 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 ZNF677Q86XU0 584 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 C17orf80Q9BSJ5 609 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 GGA3Q9NZ52 723 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 ADAM21Q9UKJ8 722 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 HEATR9A2RTY3 570 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 ALDH1A2O94788 518 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 MAPRE1Q15691 268 aaKnown RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 TRIM60Q495X7 471 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 SYCP2LQ5T4T6 812 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 BBS7Q8IWZ6 715 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 HS6ST3Q8IZP7 471 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 HES6Q96HZ4 224 aa24.16■■□□□ 1.46
NPAS3-201ENST00000346562 PRMT1Q99873 361 aaKnown RBP24.16■■□□□ 1.46
NPAS3-201ENST00000346562 UBXN8O00124 270 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 IMPDH2P12268 514 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 SOAT1P35610 550 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 LAMC2Q13753 1193 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 ZRANB3Q5FWF4 1079 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 UGT3A1Q6NUS8 523 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 FAM151AQ8WW52 585 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 PRPF18Q99633 342 aaKnown RBP24.15■■□□□ 1.46
NPAS3-201ENST00000346562 VPS9D1Q9Y2B5 631 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 KCTD17Q8N5Z5 321 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 TADA1Q96BN2 335 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 TMEM8AQ9HCN3 771 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 IGSF9BQ9UPX0 1349 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 H2AFYO75367 372 aaKnown RBP24.15■■□□□ 1.46
NPAS3-201ENST00000346562 FKBP9O95302 570 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 NPTXRO95502 500 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 CDC42EP5Q6NZY7 148 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 FKBP9P1Q75LS8 142 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 HORMAD1Q86X24 394 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 TMA16Q96EY4 203 aaKnown RBP24.15■■□□□ 1.46
NPAS3-201ENST00000346562 RBM15Q96T37 977 aaKnown RBP eCLIP24.15■■□□□ 1.46
NPAS3-201ENST00000346562 MXRA8Q9BRK3 442 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 COLEC11Q9BWP8 271 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 RANBP17Q9H2T7 1088 aaKnown RBP24.15■■□□□ 1.46
NPAS3-201ENST00000346562 VPS37AQ8NEZ2 397 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 PRR12Q9ULL5 1215 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 NEU2Q9Y3R4 380 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 RPS12P25398 132 aaKnown RBP24.15■■□□□ 1.46
NPAS3-201ENST00000346562 LRIG3Q6UXM1 1119 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 PARP9Q8IXQ6 854 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 DTNAQ9Y4J8 743 aa24.15■■□□□ 1.46
NPAS3-201ENST00000346562 SEC24DO94855 1032 aaPredicted RBP24.14■■□□□ 1.46
NPAS3-201ENST00000346562 WDR47O94967 919 aa24.14■■□□□ 1.46
NPAS3-201ENST00000346562 TTC39BQ5VTQ0 682 aaPredicted RBP24.14■■□□□ 1.46
NPAS3-201ENST00000346562 C16orf86Q6ZW13 317 aa24.14■■□□□ 1.46
NPAS3-201ENST00000346562 APOL5Q9BWW9 433 aa24.14■■□□□ 1.46
NPAS3-201ENST00000346562 GOLGA8RI6L899 631 aa24.14■■□□□ 1.46
NPAS3-201ENST00000346562 FAM49BQ9NUQ9 324 aa24.14■■□□□ 1.46
NPAS3-201ENST00000346562 NAGPAQ9UK23 515 aa24.14■■□□□ 1.46
NPAS3-201ENST00000346562 PCMTD2Q9NV79 361 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 AKAP10O43572 662 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 TCF3P15923 654 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 TAF6P49848 677 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 PHKG1Q16816 387 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 IPMKQ8NFU5 416 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 USP13Q92995 863 aaPredicted RBP24.14■■□□□ 1.45
NPAS3-201ENST00000346562 FOXP3Q9BZS1 431 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 AXIN2Q9Y2T1 843 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 ARL2BPQ9Y2Y0 163 aa24.14■■□□□ 1.45
NPAS3-201ENST00000346562 ADCK1Q86TW2 530 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.13■■□□□ 1.45
NPAS3-201ENST00000346562 SLC2A3P11169 496 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 KDSRQ06136 332 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 NAPEPLDQ6IQ20 393 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 LINC00523Q86TU6 105 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 CLEC4FQ8N1N0 589 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 GID8Q9NWU2 228 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 MPP6Q9NZW5 540 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 JCADQ9P266 1359 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 HLA-DRAP01903 254 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 FAM200BP0CF97 657 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 MYBP10242 640 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 MZF1P28698 734 aaPredicted RBP24.13■■□□□ 1.45
NPAS3-201ENST00000346562 BYSLQ13895 437 aaKnown RBP24.13■■□□□ 1.45
NPAS3-201ENST00000346562 TEX9Q8N6V9 391 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 SPATA4Q8NEY3 305 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 CRLS1Q9UJA2 301 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 BLOC1S6Q9UL45 172 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 ADGRA2Q96PE1 1338 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 ETFBP38117 255 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 NIF3L1Q9GZT8 377 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 TFRCP02786 760 aaKnown RBP24.13■■□□□ 1.45
NPAS3-201ENST00000346562 CDH18Q13634 790 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 TMEM132BQ14DG7 1078 aa24.13■■□□□ 1.45
NPAS3-201ENST00000346562 DCAF6Q58WW2 860 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms