RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CDH8P55286 799 aa22.89■■□□□ 1.25
TSPAN3-202ENST00000346495 NAA35Q5VZE5 725 aa22.89■■□□□ 1.25
TSPAN3-202ENST00000346495 SLFN11Q7Z7L1 901 aa22.89■■□□□ 1.25
TSPAN3-202ENST00000346495 ZNF653Q96CK0 615 aa22.89■■□□□ 1.25
TSPAN3-202ENST00000346495 CYFIP2Q96F07 1278 aa22.89■■□□□ 1.25
TSPAN3-202ENST00000346495 PAK6Q9NQU5 681 aaPredicted RBP22.89■■□□□ 1.25
TSPAN3-202ENST00000346495 CTTNBP2NLQ9P2B4 639 aa22.89■■□□□ 1.25
TSPAN3-202ENST00000346495 CILPO75339 1184 aa22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 MTA2O94776 668 aa22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 FTCDO95954 541 aa22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 MYBL1P10243 752 aa22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 NOMO3P69849 1222 aa22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 DSC3Q14574 896 aa22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 MRPL10Q7Z7H8 261 aaKnown RBP22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 ZNF560Q96MR9 790 aa22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 MMS19Q96T76 1030 aa22.88■■□□□ 1.25
TSPAN3-202ENST00000346495 SCN1AP35498 2009 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 FAM170AA1A519 330 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 EFCAB8A8MWE9 144 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 PIRO00625 290 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 MED7O43513 233 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 NCK2O43639 380 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 LSM8O95777 96 aaKnown RBP22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 BRD2P25440 801 aaKnown RBP22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 PNPLA4P41247 253 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 RAD23BP54727 409 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 CKAP4Q07065 602 aaKnown RBP22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 INCA1Q0VD86 236 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 DAAM2Q86T65 1068 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 MCOLN2Q8IZK6 566 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 LRRN4CLQ8ND94 238 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 CPA5Q8WXQ8 436 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 OSBPL9Q96SU4 736 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 OSBPL7Q9BZF2 842 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 WBP1LQ9NX94 342 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 UVRAGQ9P2Y5 699 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 BARX2Q9UMQ3 279 aaPredicted RBP22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 PCDHGC3Q9UN70 934 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 GIT1Q9Y2X7 761 aa22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.87■■□□□ 1.25
TSPAN3-202ENST00000346495 PPEF2O14830 753 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 SRGAP2O75044 1071 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 ZNF623O75123 536 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 TADA3O75528 432 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 SKIP12755 728 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 PASD1Q8IV76 773 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 WHAMMQ8TF30 809 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 TMEM176AQ96HP8 235 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 VCPIP1Q96JH7 1222 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 ZNF518BQ9C0D4 1074 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 AVENQ9NQS1 362 aaPredicted RBP22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 SLC38A7Q9NVC3 462 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 CNOT8Q9UFF9 292 aaKnown RBP22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 COG5Q9UP83 839 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 BUB1BO60566 1050 aaPredicted RBP22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 CFHP08603 1231 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 CD19P15391 556 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 HSPA6P17066 643 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 RPS6KA1Q15418 735 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 PEX26Q7Z412 305 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 PHF13Q86YI8 300 aaPredicted RBP22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 PPP1R10Q96QC0 940 aaKnown RBP22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 RPS6KC1Q96S38 1066 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 RNF19AQ9NV58 838 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 CEP83Q9Y592 693 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 SNX9Q9Y5X1 595 aa22.86■■□□□ 1.25
TSPAN3-202ENST00000346495 PTGESO14684 152 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 MGEA5O60502 916 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 LRPAP1P30533 357 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 CDK7P50613 346 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 LIN9Q5TKA1 542 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 MON1BQ7L1V2 547 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 SLC4A11Q8NBS3 891 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 TMEM35BQ8NCS4 154 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 CAGE1Q8TC20 777 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 TFAP2BQ92481 460 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 DEFB118Q96PH6 123 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 ZSWIM1Q9BR11 485 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 NUP85Q9BW27 656 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 ELOVL4Q9GZR5 314 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 ABCB6Q9NP58 842 aa22.85■■□□□ 1.25
TSPAN3-202ENST00000346495 CTAGE15A4D2H0 777 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 ATMINO43313 823 aaPredicted RBP22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 CTAGE8P0CG41 777 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 CCL5P13501 91 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 SSTR3P32745 418 aaPredicted RBP22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 TUBB4BP68371 445 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 SOX4Q06945 474 aaPredicted RBP22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 SV2CQ496J9 727 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 C11orf63Q6NUN7 778 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 TRAF7Q6Q0C0 670 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 CTAGE6Q86UF2 777 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 CTAGE4Q8IX94 777 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 PGBD4Q96DM1 585 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 ZFP42Q96MM3 310 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 AMFRQ9UKV5 643 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 OGDHLQ9ULD0 1010 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 KIAA1257Q9ULG3 409 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 STXBP5LQ9Y2K9 1186 aa22.84■■□□□ 1.25
TSPAN3-202ENST00000346495 A0A0U1RQF3 1178 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms