RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 F8W810 466 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 M0QZQ0 153 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 C2CD2LO14523 706 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 CYB561D2O14569 222 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 FSCN2O14926 492 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 CSPG5O95196 566 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 EFEMP2O95967 443 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 TPM2P07951 284 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 FGFR3P22607 806 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 MARSP56192 900 aaKnown RBP12.73□□□□□ -0.37
SNCA-202ENST00000345009 WNT7BP56706 349 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 MCCD1P59942 119 aaPredicted RBP12.73□□□□□ -0.37
SNCA-202ENST00000345009 NCOA4Q13772 614 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 CAMK1Q14012 370 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 ZACNQ401N2 412 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 KIAA0319Q5VV43 1072 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 ADGRD1Q6QNK2 874 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 SV2AQ7L0J3 742 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
SNCA-202ENST00000345009 THEM5Q8N1Q8 247 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 MICALL1Q8N3F8 863 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 C3orf58Q8NDZ4 430 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 ZNF516Q92618 1163 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 TAF4BQ92750 862 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 SENP8Q96LD8 212 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 DNAI2Q9GZS0 605 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 STXBP5LQ9Y2K9 1186 aa12.73□□□□□ -0.37
SNCA-202ENST00000345009 C2orf71A6NGG8 1288 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 MAP3K7O43318 606 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 C1RP00736 705 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 C4BPAP04003 597 aaKnown RBP12.72□□□□□ -0.37
SNCA-202ENST00000345009 FAM163BP0C2L3 166 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 TRIM49P0CI25 452 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 TRIM49CP0CI26 452 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 TYMPP19971 482 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 KLRC2P26717 231 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 MTIF2P46199 727 aaKnown RBP12.72□□□□□ -0.37
SNCA-202ENST00000345009 BRCC3P46736 316 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 GCLMP48507 274 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 AARSP49588 968 aaKnown RBP eCLIP12.72□□□□□ -0.37
SNCA-202ENST00000345009 MXI1P50539 228 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 TNNC1P63316 161 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 DLG4P78352 724 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 MYL5Q02045 173 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 YWHAHQ04917 246 aaPredicted RBP12.72□□□□□ -0.37
SNCA-202ENST00000345009 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 PSMD5Q16401 504 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 ZSCAN23Q3MJ62 389 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 WDR44Q5JSH3 913 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 TDRD10Q5VZ19 366 aaKnown RBP12.72□□□□□ -0.37
SNCA-202ENST00000345009 ZNF280DQ6N043 979 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 CD300LGQ6UXG3 332 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 TAS1R1Q7RTX1 841 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 TMEM86AQ8N2M4 240 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 SPATA18Q8TC71 538 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 PIK3R5Q8WYR1 880 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 VN1R3Q9BXE9 311 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 DNAJC25Q9H1X3 360 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 GDAP2Q9NXN4 497 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 FNIP2Q9P278 1114 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 SIX4Q9UIU6 781 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 NFE2L3Q9Y4A8 694 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 SNX9Q9Y5X1 595 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 BACE2Q9Y5Z0 518 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 CDH23Q9H251 3354 aa12.72□□□□□ -0.37
SNCA-202ENST00000345009 PTPRJQ12913 1337 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 BECN2A8MW95 431 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 I3L4J1 428 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 P4HA2O15460 535 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 OAZ2O95190 189 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 STAU1O95793 577 aaKnown RBP12.71□□□□□ -0.37
SNCA-202ENST00000345009 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.37
SNCA-202ENST00000345009 TRIM21P19474 475 aaKnown RBP12.71□□□□□ -0.37
SNCA-202ENST00000345009 EEF1GP26641 437 aaKnown RBP12.71□□□□□ -0.37
SNCA-202ENST00000345009 TKTP29401 623 aaKnown RBP12.71□□□□□ -0.37
SNCA-202ENST00000345009 IRS1P35568 1242 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 PIK3CAP42336 1068 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 NRIP1P48552 1158 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 NDUFV1P49821 464 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 TPM4P67936 248 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.37
SNCA-202ENST00000345009 ZNF699Q32M78 642 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 WDR72Q3MJ13 1102 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 ANO6Q4KMQ2 910 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 TCEAL5Q5H9L2 206 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 ZNF667Q5HYK9 610 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 OVOS1Q6IE37 1185 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
SNCA-202ENST00000345009 TRIM59Q8IWR1 403 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 TOP6BLQ8N6T0 577 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 FBXL13Q8NEE6 735 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 PLEKHO2Q8TD55 490 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 CNOT6LQ96LI5 555 aaKnown RBP12.71□□□□□ -0.37
SNCA-202ENST00000345009 MMS19Q96T76 1030 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 BPIFA3Q9BQP9 254 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 ANP32EQ9BTT0 268 aa12.71□□□□□ -0.37
SNCA-202ENST00000345009 GZF1Q9H116 711 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms