RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 FGFR1P11362 822 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 CHRNB2P17787 502 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 TNFAIP3P21580 790 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 RPL9P32969 192 aaKnown RBP17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 PDE6CP51160 858 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 LILRA4P59901 499 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 GLYCTKQ8IVS8 523 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 MMS19Q96T76 1030 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 GDAP2Q9NXN4 497 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 NAGPAQ9UK23 515 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 PCDHB7Q9Y5E2 793 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 PCDHA13Q9Y5I0 950 aa17.47■□□□□ 0.39
CEACAM1-202ENST00000344391 A0A0U1RQJ8 604 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 PODXLO00592 558 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 RAG1P15918 1043 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 MAGEA1P43355 309 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 CLCNKBP51801 687 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 CDR2Q01850 454 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 INCA1Q0VD86 236 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 TUSC3Q13454 348 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 SV2CQ496J9 727 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 NOMO2Q5JPE7 1267 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 MFSD5Q6N075 450 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 ZNF677Q86XU0 584 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 RPUSD2Q8IZ73 545 aaKnown RBP17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 TTC39CQ8N584 583 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 ATRIPQ8WXE1 791 aa17.46■□□□□ 0.39
CEACAM1-202ENST00000344391 LTBP2Q14767 1821 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 GOLGA6L9A6NEM1 432 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 CILPO75339 1184 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 CALCAP01258 141 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 VAV2P52735 878 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 FMO1Q01740 532 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 IKBKEQ14164 716 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 UPP1Q16831 310 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 TAF3Q5VWG9 929 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 ALKBH5Q6P6C2 394 aaKnown RBP17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 LIMS2Q7Z4I7 341 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 URGCPQ8TCY9 931 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 WHAMMQ8TF30 809 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 DDX27Q96GQ7 796 aaKnown RBP17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 KANSL3Q9P2N6 904 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 CACNG4Q9UBN1 327 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 LRFN2Q9ULH4 789 aa17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 BARX2Q9UMQ3 279 aaPredicted RBP17.45■□□□□ 0.38
CEACAM1-202ENST00000344391 CASTOR2A6NHX0 329 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 MMEP08473 750 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 CSF2RAP15509 400 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 IGFBP6P24592 240 aaPredicted RBP17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 GNA15P30679 374 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 SOWAHAQ2M3V2 549 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 ZNF394Q53GI3 561 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 CCDC122Q5T0U0 273 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 C10orf76Q5T2E6 689 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 ZNF662Q6ZS27 426 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 KIAA1328Q86T90 577 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 PALB2Q86YC2 1186 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 UROC1Q96N76 676 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 PCDHB18PQ96TA0 734 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 PAAF1Q9BRP4 392 aa17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 RNF216Q9NWF9 866 aaPredicted RBP17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 FNDC1Q4ZHG4 1894 aaPredicted RBP17.44■□□□□ 0.38
CEACAM1-202ENST00000344391 RCCD1A6NED2 376 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 ARHGAP25P42331 645 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 RAD23BP54727 409 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 DSC1Q08554 894 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 NPAS4Q8IUM7 802 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 TMEM199Q8N511 208 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 C3orf58Q8NDZ4 430 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 TWNKQ96RR1 684 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 MRPL45Q9BRJ2 306 aaKnown RBP17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 ELOVL4Q9GZR5 314 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 LUC7LQ9NQ29 371 aaKnown RBP17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 SEPT11Q9NVA2 429 aaKnown RBP17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 TBC1D13Q9NVG8 400 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 HMGXB4Q9UGU5 601 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 TFR2Q9UP52 801 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 PJA2O43164 708 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 HOXA2O43364 376 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 TACC1O75410 805 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 DDHD2O94830 711 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 PAEPP09466 180 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 NDST1P52848 882 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 NYAP1Q6ZVC0 841 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 DPH6Q7L8W6 267 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 ZNF280BQ86YH2 543 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 TOP6BLQ8N6T0 577 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 SLC4A11Q8NBS3 891 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 ZNF606Q8WXB4 792 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 CASD1Q96PB1 797 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 LACRTQ9GZZ8 138 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 LZTFL1Q9NQ48 299 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 RRAGDQ9NQL2 400 aaPredicted RBP17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 L1RE1Q9UN81 338 aa17.43■□□□□ 0.38
CEACAM1-202ENST00000344391 ABHD14A-ACY1A0A1B0GW23 586 aa17.42■□□□□ 0.38
CEACAM1-202ENST00000344391 THAP12O43422 761 aa17.42■□□□□ 0.38
CEACAM1-202ENST00000344391 B4GALT3O60512 393 aa17.42■□□□□ 0.38
CEACAM1-202ENST00000344391 HUS1O60921 280 aa17.42■□□□□ 0.38
CEACAM1-202ENST00000344391 ABL1P00519 1130 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms