RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SMG5Q9UPR3 1016 aaKnown RBP13.08□□□□□ -0.32
SNRNP48-201ENST00000342415 ATG16L1Q676U5 607 aa13.08□□□□□ -0.32
SNRNP48-201ENST00000342415 BTNL9Q6UXG8 535 aa13.08□□□□□ -0.32
SNRNP48-201ENST00000342415 AGGF1Q8N302 714 aaeCLIP13.08□□□□□ -0.32
SNRNP48-201ENST00000342415 AGAP3Q96P47 875 aa13.08□□□□□ -0.32
SNRNP48-201ENST00000342415 MED10Q9BTT4 135 aa13.08□□□□□ -0.32
SNRNP48-201ENST00000342415 FBXO40Q9UH90 709 aa13.08□□□□□ -0.32
SNRNP48-201ENST00000342415 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 M0R2N6 131 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 LDHAP00338 332 aaKnown RBP13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 KRT16P08779 473 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 SFNP31947 248 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 MMEL1Q495T6 779 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ENOSF1Q7L5Y1 443 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 YTHDF3Q7Z739 585 aaKnown RBP13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 RCOR2Q8IZ40 523 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 C3orf20Q8ND61 904 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 OR6B3Q8NGW1 331 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 UBA3Q8TBC4 463 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 SPOCK2Q92563 424 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 DHX35Q9H5Z1 703 aaKnown RBP13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 SLC38A10Q9HBR0 1119 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 APOBEC2Q9Y235 224 aaKnown RBP13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 MED7O43513 233 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 KIF1CO43896 1103 aaKnown RBP13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 KRT38O76015 456 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ADRA2BP18089 450 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ROR1Q01973 937 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 DUOXA2Q1HG44 320 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 TTC27Q6P3X3 843 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 SLC25A41Q8N5S1 370 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 FBXO36Q8NEA4 188 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ETNPPLQ8TBG4 499 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 KLC2Q9H0B6 622 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 MANSC1Q9H8J5 431 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 PCDHA3Q9Y5H8 950 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 IVNS1ABPQ9Y6Y0 642 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 KRT7P08729 469 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 TFDP1Q14186 410 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 FAM160B1Q5W0V3 765 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 MFSD7Q6UXD7 560 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ACTL9Q8TC94 416 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ATG4CQ96DT6 458 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 NAF1Q96HR8 494 aaKnown RBP13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 CDHR1Q96JP9 859 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 PCDHB18PQ96TA0 734 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 YY1AP1Q9H869 796 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 RXFP1Q9HBX9 757 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 KIAA1586Q9HCI6 787 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 ANGPTL2Q9UKU9 493 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 C15orf41Q9Y2V0 281 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 CSADQ9Y600 493 aa13.07□□□□□ -0.32
SNRNP48-201ENST00000342415 NALCNQ8IZF0 1738 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 CCDC22O60826 627 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 DGAT1O75907 488 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ZWINTO95229 277 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 PDGFRAP16234 1089 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 TBXAS1P24557 533 aaPredicted RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 MOXD1Q6UVY6 613 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ABTB1Q969K4 478 aaPredicted RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 MYLK2Q9H1R3 596 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 C12orf65Q9H3J6 166 aaKnown RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 AS3MTQ9HBK9 375 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 NDE1Q9NXR1 346 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 WHRNQ9P202 907 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ZC3H7BQ9UGR2 993 aaKnown RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 TRIM49D1C9J1S8 452 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 CES2O00748 559 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 KCNA3P22001 575 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 PREPLQ4J6C6 727 aaPredicted RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 SPATA24Q86W54 205 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 PARD3BQ8TEW8 1205 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 MAGEB18Q96M61 343 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 GLIS2Q9BZE0 524 aaPredicted RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 DCLK3Q9C098 648 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 FAM49AQ9H0Q0 323 aaPredicted RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 PIH1D1Q9NWS0 290 aaKnown RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 KCND2Q9NZV8 630 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ENTPD5O75356 428 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ADRB2P07550 413 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ADRA1DP25100 572 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 TPD52P55327 224 aaPredicted RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 OTUD4Q01804 1114 aaKnown RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 BMPR2Q13873 1038 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 PDE1CQ14123 709 aaPredicted RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ANKRD20A2Q5SQ80 823 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ANKRD20A1Q5TYW2 823 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 MCOLN2Q8IZK6 566 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 LRRN4Q8WUT4 740 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 CNOT7Q9UIV1 285 aaKnown RBP13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 F8VP50 259 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 NEMP1O14524 444 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 CREB3O43889 395 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 HSPA4LO95757 839 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 SERPINB4P48594 390 aa13.06□□□□□ -0.32
SNRNP48-201ENST00000342415 ZNF200P98182 395 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms