RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 PAPD7Q5XG87 772 aaKnown RBP20.25■□□□□ 0.83
SH2B3-201ENST00000341259 TMC2Q8TDI7 906 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 ZNF473Q8WTR7 871 aaKnown RBP20.25■□□□□ 0.83
SH2B3-201ENST00000341259 CGRRF1Q99675 332 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 KIAA1683Q9H0B3 1180 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 SUN2Q9UH99 717 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 MPZL3Q6UWV2 235 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 FBXO16Q8IX29 292 aaPredicted RBP20.25■□□□□ 0.83
SH2B3-201ENST00000341259 PPHLN1Q8NEY8 458 aaKnown RBP20.25■□□□□ 0.83
SH2B3-201ENST00000341259 SMYD3Q9H7B4 428 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 C3P01024 1663 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 ZC3H11AO75152 810 aaKnown RBP eCLIP20.25■□□□□ 0.83
SH2B3-201ENST00000341259 MAGEA4P43358 317 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 GTF2A2P52657 109 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 HABP4Q5JVS0 413 aaKnown RBP20.25■□□□□ 0.83
SH2B3-201ENST00000341259 LACRTQ9GZZ8 138 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 HACD3Q9P035 362 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 H0Y3Z8 333 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 PSTPIP1O43586 416 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 TADA2AO75478 443 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 CLCN3P51790 818 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 CYP24A1Q07973 514 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 UPF3AQ9H1J1 476 aaKnown RBP20.25■□□□□ 0.83
SH2B3-201ENST00000341259 SARS2Q9NP81 518 aaKnown RBP20.25■□□□□ 0.83
SH2B3-201ENST00000341259 PAK5Q9P286 719 aa20.25■□□□□ 0.83
SH2B3-201ENST00000341259 PRLRP16471 622 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 SH3BGRP55822 239 aaPredicted RBP20.24■□□□□ 0.83
SH2B3-201ENST00000341259 KDELC2Q7Z4H8 507 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 ACSF2Q96CM8 615 aaPredicted RBP20.24■□□□□ 0.83
SH2B3-201ENST00000341259 NUDT12Q9BQG2 462 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 TRIM15Q9C019 465 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 PPP2R3BQ9Y5P8 575 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 GRIK5Q16478 980 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 SMIM22K7EJ46 135 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 HUNKP57058 714 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 KYNUQ16719 465 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 C15orf52Q6ZUT6 534 aaKnown RBP20.24■□□□□ 0.83
SH2B3-201ENST00000341259 ZBTB18Q99592 522 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 ETNK1Q9HBU6 452 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 CHMP2BQ9UQN3 213 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 C3orf70A6NLC5 250 aaPredicted RBP20.24■□□□□ 0.83
SH2B3-201ENST00000341259 E5RI56 91 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 SLC30A10Q6XR72 485 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 RNF135Q8IUD6 432 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 ZNF507Q8TCN5 953 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 SLC5A5Q92911 643 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 AKT1S1Q96B36 256 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 LMCD1Q9NZU5 365 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 GAKO14976 1311 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 DSG3P32926 999 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 FNTAP49354 379 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 VEPH1Q14D04 833 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 E2F4Q16254 413 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 FASTKD1Q53R41 847 aaKnown RBP20.24■□□□□ 0.83
SH2B3-201ENST00000341259 SLC7A14Q8TBB6 771 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 USP33Q8TEY7 942 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 ROPN1BQ9BZX4 212 aaPredicted RBP20.24■□□□□ 0.83
SH2B3-201ENST00000341259 ROPN1Q9HAT0 212 aaPredicted RBP20.24■□□□□ 0.83
SH2B3-201ENST00000341259 ORC6Q9Y5N6 252 aa20.24■□□□□ 0.83
SH2B3-201ENST00000341259 SLITRK3O94933 977 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 TAF6P49848 677 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 C4orf33Q8N1A6 199 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 ATPAF2Q8N5M1 289 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 FGD4Q96M96 766 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 MROH8Q9H579 483 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 EFHC1Q5JVL4 640 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 OTOP1Q7RTM1 612 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 IL17RAQ96F46 866 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 TRPV6Q9H1D0 765 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 PNPLA4P41247 253 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 ZNF200P98182 395 aaPredicted RBP20.23■□□□□ 0.83
SH2B3-201ENST00000341259 MYBPC2Q14324 1141 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 DCAF6Q58WW2 860 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 DDX27Q96GQ7 796 aaKnown RBP20.23■□□□□ 0.83
SH2B3-201ENST00000341259 CCT8L2Q96SF2 557 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 DUSP9Q99956 384 aaKnown RBP20.23■□□□□ 0.83
SH2B3-201ENST00000341259 SCOCQ9UIL1 159 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 UBA6A0AVT1 1052 aaPredicted RBP20.23■□□□□ 0.83
SH2B3-201ENST00000341259 C17orf102A2RUQ5 167 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 ZBBXA8MT70 800 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 AP3B1O00203 1094 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 SOX10P56693 466 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 GRAMD1BQ3KR37 738 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 C1orf146Q5VVC0 180 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 TAS1R2Q8TE23 839 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 XPO6Q96QU8 1125 aaKnown RBP20.23■□□□□ 0.83
SH2B3-201ENST00000341259 BLOC1S4Q9NUP1 217 aa20.23■□□□□ 0.83
SH2B3-201ENST00000341259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.23■□□□□ 0.837e-6■■■■□ 20.5
SH2B3-201ENST00000341259 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.23■□□□□ 0.83
SH2B3-201ENST00000341259 GTPBP10A4D1E9 387 aaKnown RBP20.22■□□□□ 0.83
SH2B3-201ENST00000341259 PSMD3O43242 534 aa20.22■□□□□ 0.83
SH2B3-201ENST00000341259 TRPA1O75762 1119 aa20.22■□□□□ 0.83
SH2B3-201ENST00000341259 MAPTP10636 758 aaKnown RBP20.22■□□□□ 0.83
SH2B3-201ENST00000341259 ORC1Q13415 861 aa20.22■□□□□ 0.83
SH2B3-201ENST00000341259 MTHFD1LQ6UB35 978 aa20.22■□□□□ 0.83
SH2B3-201ENST00000341259 NOP9Q86U38 636 aaKnown RBP20.22■□□□□ 0.83
SH2B3-201ENST00000341259 PPCSQ9HAB8 311 aa20.22■□□□□ 0.83
SH2B3-201ENST00000341259 UBQLN1Q9UMX0 589 aaKnown RBP20.22■□□□□ 0.83
SH2B3-201ENST00000341259 SIGLEC1Q9BZZ2 1709 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms