RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 PPP1R2P3Q6NXS1 205 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 KDM7AQ6ZMT4 941 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 RHOT1Q8IXI2 618 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 PPTC7Q8NI37 304 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 GTF3C2Q8WUA4 911 aaPredicted RBP16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 RUNDC3BQ96NL0 473 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 KATNBL1Q9H079 304 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 EPB41L4BQ9H329 900 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 VTA1Q9NP79 307 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 PRMT7Q9NVM4 692 aaPredicted RBP16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 SIX4Q9UIU6 781 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 MCM3APO60318 1980 aa16.9■□□□□ 0.3
CCDC144A-202ENST00000340621 RBM47A0AV96 593 aaKnown RBP16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 TMEM191CA6NGB0 347 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 LACTBL1A8MY62 500 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 ECEL1O95672 775 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 SNAI1O95863 264 aaPredicted RBP16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 VTNP04004 478 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 NFICP08651 508 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 STAG3L1P0CL83 205 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 CETPP11597 493 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 NR1D1P20393 614 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 LINC01465Q8N7H1 131 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 C16orf70Q9BSU1 422 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 AKT3Q9Y243 479 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 GRIN2DO15399 1336 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 CCL15-CCL14A0A0B4J2E2 113 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 LSM8O95777 96 aaKnown RBP16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 RALAP11233 206 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 SSR1P43307 286 aaKnown RBP16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 PMS2P54278 862 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 POU5F1BQ06416 359 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 CCL15Q16663 113 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 ANKS1BQ7Z6G8 1248 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 CCDC50Q8IVM0 306 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 TMEM35BQ8NCS4 154 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 BRI3BPQ8WY22 251 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 CPB2Q96IY4 423 aa16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 R3HDM2Q9Y2K5 976 aaKnown RBP16.89■□□□□ 0.29
CCDC144A-202ENST00000340621 PASKQ96RG2 1323 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 TCRBV5S1A1TA0A578 114 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 MAGEB2O15479 319 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 PSTPIP1O43586 416 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 STRNO43815 780 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 IL18RAPO95256 599 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 IVLP07476 585 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 RAP1GAPP47736 663 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 CDH8P55286 799 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 PDCLQ13371 301 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 PPP1R7Q15435 360 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 FAM187BQ17R55 369 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 WDR72Q3MJ13 1102 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 SPDYCQ5MJ68 293 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 C1orf127Q8N9H9 656 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 SLCO2A1Q92959 643 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 ART4Q93070 314 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 PABPC3Q9H361 631 aaKnown RBP16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 BCCIPQ9P287 314 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 IQCA1LA6NCM1 817 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 EIF3HO15372 352 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 TCF4P15884 667 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 GBP1P32455 592 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 GJC1P36383 396 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 KLF1Q13351 362 aaPredicted RBP16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 SKIDA1Q1XH10 827 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 ATP13A4Q4VNC1 1196 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 RUFY4Q6ZNE9 571 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 PNMA8AQ86V59 439 aaPredicted RBP16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 KATNAL2Q8IYT4 538 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 EMID1Q96A84 441 aaPredicted RBP16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 RNF25Q96BH1 459 aaPredicted RBP16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 DCLK3Q9C098 648 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 PDZD7Q9H5P4 517 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 PARP2Q9UGN5 583 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 IP6K2Q9UHH9 426 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 IVNS1ABPQ9Y6Y0 642 aa16.88■□□□□ 0.29
CCDC144A-202ENST00000340621 H3BRB1 525 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 PPFIA4O75335 1185 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 SHBGP04278 402 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 CALB1P05937 261 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 EIF4BP23588 611 aaKnown RBP16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 HPDP32754 393 aaPredicted RBP16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 GTF2A2P52657 109 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 GUCY1A3Q02108 690 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 KRT17Q04695 432 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 ZNF252P-AS1Q0IIN9 211 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 JADE1Q6IE81 842 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 MTHFD1LQ6UB35 978 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 IFNLR1Q8IU57 520 aaPredicted RBP16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 MAIP1Q8WWC4 291 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 ZNF518BQ9C0D4 1074 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 SEMA4AQ9H3S1 761 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 RABEP2Q9H5N1 569 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 PCDHGC3Q9UN70 934 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 SLC45A1Q9Y2W3 748 aa16.87■□□□□ 0.29
CCDC144A-202ENST00000340621 F8VP50 259 aa16.86■□□□□ 0.29
CCDC144A-202ENST00000340621 TP73O15350 636 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms