RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 TROAPQ12815 778 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 TAS2R42Q7RTR8 314 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 LDHDQ86WU2 507 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 SLC13A5Q86YT5 568 aaPredicted RBP9.1□□□□□ -0.95
RTN3-202ENST00000339997 GPD1LQ8N335 351 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 RMDN1Q96DB5 314 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 KAZALD1Q96I82 304 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 ZBTB18Q99592 522 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 ISCA1Q9BUE6 129 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 PRDM5Q9NQX1 630 aaPredicted RBP9.1□□□□□ -0.95
RTN3-202ENST00000339997 CYP26B1Q9NR63 512 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 ZSCAN32Q9NX65 697 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 SLC39A10Q9ULF5 831 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 SMG5Q9UPR3 1016 aaKnown RBP9.1□□□□□ -0.95
RTN3-202ENST00000339997 ARAP3Q8WWN8 1544 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 MAP3K4Q9Y6R4 1608 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 E5RI56 91 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 E9PBE3 544 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 ANGPT2O15123 496 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 KLHL41O60662 606 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 EYA4O95677 639 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 ESRRBO95718 433 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 HMBSP08397 361 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 CIITAP33076 1130 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 MAP3K7CLP57077 242 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 PPATQ06203 517 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 TRADDQ15628 312 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 SLC44A4Q53GD3 710 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 SPDYAQ5MJ70 313 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 ZNF571Q7Z3V5 609 aaPredicted RBP9.1□□□□□ -0.95
RTN3-202ENST00000339997 MICU2Q8IYU8 434 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 USP13Q92995 863 aaPredicted RBP9.1□□□□□ -0.95
RTN3-202ENST00000339997 DDX50Q9BQ39 737 aaKnown RBP9.1□□□□□ -0.95
RTN3-202ENST00000339997 TMBIM4Q9HC24 238 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 ACP6Q9NPH0 428 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 NDFIP2Q9NV92 336 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 CTNNAL1Q9UBT7 734 aa9.1□□□□□ -0.95
RTN3-202ENST00000339997 HNRNPCL2B2RXH8 293 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 HNRNPCL1O60812 293 aaKnown RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 ATP6V1G2O95670 118 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 MIER2Q8N344 545 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 MAP3K14Q99558 947 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 CEP41Q9BYV8 373 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 AGAP1Q9UPQ3 857 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 SNX13Q9Y5W8 968 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 USP32Q8NFA0 1604 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 A0A087X0B3 334 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 MEI4A8MW99 385 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 XPOTO43592 962 aaKnown RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 CALCAP01258 141 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 PAPOLAP51003 745 aaKnown RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 LAMB3Q13751 1172 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 DUOXA2Q1HG44 320 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 NLGN1Q8N2Q7 840 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 ARHGAP18Q8N392 663 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 BHMTQ93088 406 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 PABPC5Q96DU9 382 aaKnown RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 KIF12Q96FN5 646 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 COG4Q9H9E3 785 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 CYP4F12Q9HCS2 524 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 GPATCH2LQ9NWQ4 482 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 MTMR4Q9NYA4 1195 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 SPTLC1O15269 473 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 HUS1O60921 280 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 ATP9AO75110 1047 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 LDHAP00338 332 aaKnown RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 RARBP10826 455 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 GTF2H1P32780 548 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 AQP5P55064 265 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 NCOA4Q13772 614 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 RABL6Q3YEC7 729 aaPredicted RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 TCHHL1Q5QJ38 904 aaPredicted RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 TTI2Q6NXR4 508 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 LRRC71Q8N4P6 559 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 EMC1Q8N766 993 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 IFT43Q96FT9 208 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 WNK4Q96J92 1243 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 CDHR1Q96JP9 859 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 ERGIC2Q96RQ1 377 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 ATF5Q9Y2D1 282 aaPredicted RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 APOL1O14791 398 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 TBC1D12O60347 775 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 ASNSP08243 561 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 RFC5P40937 340 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 NFIXQ14938 502 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 GPAT2Q6NUI2 795 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 ADCK1Q86TW2 530 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 METTL23Q86XA0 190 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 CBWD2Q8IUF1 395 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 C1orf131Q8NDD1 294 aaKnown RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 SCG3Q8WXD2 468 aaKnown RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 SEMA4DQ92854 862 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 WRNIP1Q96S55 665 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 CBWD1Q9BRT8 395 aa9.09□□□□□ -0.95
RTN3-202ENST00000339997 TARS2Q9BW92 718 aaKnown RBP9.09□□□□□ -0.95
RTN3-202ENST00000339997 PFASO15067 1338 aa9.09□□□□□ -0.96
RTN3-202ENST00000339997 PDE5AO76074 875 aa9.08□□□□□ -0.96
RTN3-202ENST00000339997 CYP19A1P11511 503 aaPredicted RBP9.08□□□□□ -0.96
RTN3-202ENST00000339997 BGNP21810 368 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms