RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 FIGNQ5HY92 759 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 THEMIS2Q5TEJ8 643 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ARID3BQ8IVW6 561 aaPredicted RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 FAM71DQ8N9W8 422 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 PPHLN1Q8NEY8 458 aaKnown RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 UBA3Q8TBC4 463 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 PTPRUQ92729 1446 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 AP3B1O00203 1094 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 MAGEB2O15479 319 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 KLRK1P26718 216 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ATXN3P54252 364 aaPredicted RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 CENPCQ03188 943 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 C2CD6Q53TS8 623 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ATF7IP2Q5U623 682 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ZNF677Q86XU0 584 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 EME1Q96AY2 570 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ZSWIM1Q9BR11 485 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 RUSC1Q9BVN2 902 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 MRPL1Q9BYD6 325 aaKnown RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 MTO1Q9Y2Z2 717 aaKnown RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 hCG_2014768A0A024R1R8 64 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ADCY3O60266 1144 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 CCND1P24385 295 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 CPA2P48052 419 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 FNTAP49354 379 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 MROH9Q5TGP6 573 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 CENPPQ6IPU0 288 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 TTC30BQ8N4P2 665 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 CATSPER1Q8NEC5 780 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 SCFD1Q8WVM8 642 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ATG4AQ8WYN0 398 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ACSF2Q96CM8 615 aaPredicted RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 ELP3Q9H9T3 547 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 GRID1Q9ULK0 1009 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 SMAPO00193 183 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 IGF2BP3O00425 579 aaKnown RBP eCLIP13.07□□□□□ -0.32
OTOF-203ENST00000339598 EXTL3O43909 919 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 TLR2O60603 784 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 MED24O75448 989 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ZNF189O75820 626 aaPredicted RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 BRD2P25440 801 aaKnown RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 GRIK1P39086 918 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 CORO7P57737 925 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 SNRPFP62306 86 aaKnown RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 TBCCQ15814 346 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 DCAF6Q58WW2 860 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 LRRC34Q8IZ02 419 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 RIBC1Q8N443 379 aaPredicted RBP13.07□□□□□ -0.32
OTOF-203ENST00000339598 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 OR6J1Q8NGC5 347 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 FBXO25Q8TCJ0 367 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 E2F7Q96AV8 911 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 PACSIN1Q9BY11 444 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
OTOF-203ENST00000339598 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 MYO1DO94832 1006 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 RFC5P40937 340 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 TRADDQ15628 312 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 CBWD2Q8IUF1 395 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 NUP93Q8N1F7 819 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 C1orf131Q8NDD1 294 aaKnown RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 MYCBPAPQ8TBZ2 947 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 LZICQ8WZA0 190 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 PBXIP1Q96AQ6 731 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 TMEM39BQ9GZU3 492 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 CHCHD3Q9NX63 227 aaKnown RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 ARHGEF38Q9NXL2 777 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.06□□□□□ -0.32
OTOF-203ENST00000339598 KIF17Q9P2E2 1029 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 TRIM49D1C9J1S8 452 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 KLHL2O95198 593 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 POLBP06746 335 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 PRLRP16471 622 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 ACAD10Q6JQN1 1059 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 LRRC6Q86X45 466 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 SCFD2Q8WU76 684 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 DNAJC9Q8WXX5 260 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 ZNF669Q96BR6 464 aaPredicted RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 ATG4CQ96DT6 458 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 TBX20Q9UMR3 447 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 ZSCAN9O15535 394 aaPredicted RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 HMOX2P30519 316 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 ABCE1P61221 599 aaKnown RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 PDK1Q15118 436 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 CYP4A22Q5TCH4 519 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 PAPD7Q5XG87 772 aaKnown RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 SERPINB12Q96P63 405 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 SLC40A1Q9NP59 571 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 GPRC5CQ9NQ84 441 aa13.06□□□□□ -0.32
OTOF-203ENST00000339598 C20orf96Q9NUD7 363 aaPredicted RBP13.06□□□□□ -0.32
OTOF-203ENST00000339598 CTSHP09668 335 aa13.05□□□□□ -0.32
OTOF-203ENST00000339598 VEPH1Q14D04 833 aa13.05□□□□□ -0.32
OTOF-203ENST00000339598 ANO4Q32M45 955 aa13.05□□□□□ -0.32
OTOF-203ENST00000339598 BOLA3Q53S33 107 aa13.05□□□□□ -0.32
OTOF-203ENST00000339598 FAXCQ5TGI0 409 aa13.05□□□□□ -0.32
OTOF-203ENST00000339598 SPATA2LQ8IUW3 424 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms