RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 SIGIRRQ6IA17 410 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 PIK3AP1Q6ZUJ8 805 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 UBE2Q1Q7Z7E8 422 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CROCCP3Q8IVE0 287 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ZDHHC14Q8IZN3 488 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 SPERTQ8NA61 448 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 FAM172AQ8WUF8 416 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 LGR6Q9HBX8 967 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 AAASQ9NRG9 546 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 GIN1Q9NXP7 522 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 NCKIPSDQ9NZQ3 722 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 PFDN6O15212 129 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CYP1A2P05177 515 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ABCB4P21439 1286 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 SERPINB6P35237 376 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ACADVLP49748 655 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 EPHB1P54762 984 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CSE1LP55060 971 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ASIC1P78348 528 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ZNF200P98182 395 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 SPIDRQ14159 915 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 LRRC41Q15345 812 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 C6orf52Q5T4I8 152 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CCDC62Q6P9F0 684 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ZNF571Q7Z3V5 609 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 NT5DC3Q86UY8 548 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 SNX29P2Q8IUI4 249 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CLVS1Q8IUQ0 354 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 RASGEF1CQ8N431 466 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 BRSK1Q8TDC3 778 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 DCPSQ96C86 337 aaKnown RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ACAP3Q96P50 834 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 ACP6Q9NPH0 428 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 LRRC4BQ9NT99 713 aa10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 CHORDC1Q9UHD1 332 aaPredicted RBP10.16□□□□□ -0.78
PTCHD4-201ENST00000339488 FMN2Q9NZ56 1722 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 FLT1P17948 1338 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 KRBA1A5PL33 1030 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 ARHGAP42A6NI28 874 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 RARBP10826 455 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 RARGP13631 454 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 IFNAR1P17181 557 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 WEE1P30291 646 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 NR4A2P43354 598 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 C21orf59P57076 290 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 EIF4A1P60842 406 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 PPP2R5EQ16537 467 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 SPDYCQ5MJ68 293 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 TMCO4Q5TGY1 634 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 PTCD2Q8WV60 388 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 PSPC1Q8WXF1 523 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 GFM2Q969S9 779 aaKnown RBP10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 HES6Q96HZ4 224 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 C9orf72Q96LT7 481 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 UIMC1Q96RL1 719 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 TMEM109Q9BVC6 243 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 NMUR2Q9GZQ4 415 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 SAR1AQ9NR31 198 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 PACSIN3Q9UKS6 424 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 INPP5FQ9Y2H2 1132 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 STXBP5LQ9Y2K9 1186 aa10.15□□□□□ -0.78
PTCHD4-201ENST00000339488 C2CD2LO14523 706 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 TNPO2O14787 897 aaKnown RBP10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 TBCAO75347 108 aaKnown RBP10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 KRT75O95678 551 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 VDRP11473 427 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 CD247P20963 164 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 ETFBP38117 255 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 EPS15P42566 896 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 PTGIRP43119 386 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 ACTR3P61158 418 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 ZBTB17Q13105 803 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 SCARF1Q14162 830 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 GRIK5Q16478 980 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 CYP4F22Q6NT55 531 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 KSR2Q6VAB6 950 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 PRR23BQ6ZRT6 265 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 RSPH3Q86UC2 560 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 MYO1HQ8N1T3 1032 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 ICA1LQ8NDH6 482 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 OR7G1Q8NGA0 311 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 GRK7Q8WTQ7 553 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 OSCP1Q8WVF1 389 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 HSPH1Q92598 858 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 ALG3Q92685 438 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 TAMM41Q96BW9 452 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 MAK16Q9BXY0 300 aaKnown RBP10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 PLEKHA5Q9HAU0 1116 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 ZNHIT2Q9UHR6 403 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 AGO2Q9UKV8 859 aaKnown RBP10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 TTC7AQ9ULT0 858 aaPredicted RBP10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 CORINQ9Y5Q5 1042 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 TACC3Q9Y6A5 838 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 LTBP4Q8N2S1 1624 aa10.15□□□□□ -0.79
PTCHD4-201ENST00000339488 SPATA31A3Q5VYP0 1347 aa10.14□□□□□ -0.79
PTCHD4-201ENST00000339488 IGSF9BQ9UPX0 1349 aa10.14□□□□□ -0.79
PTCHD4-201ENST00000339488 AKAP12Q02952 1782 aa10.14□□□□□ -0.79
PTCHD4-201ENST00000339488 MYH3P11055 1940 aa10.14□□□□□ -0.79
PTCHD4-201ENST00000339488 A8MXQ7 604 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms