RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TIMM13Q9Y5L4 95 aaPredicted RBP17.01■□□□□ 0.31
LINC01116-202ENST00000339037 TTC26A0AVF1 554 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 H0YCG3 227 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 TDGF1P13385 188 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 LRPAP1P30533 357 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 AARSP49588 968 aaKnown RBP eCLIP17■□□□□ 0.31
LINC01116-202ENST00000339037 CCR3P51677 355 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 RILPL1Q5EBL4 403 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 HYIQ5T013 277 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 TMEM130Q8N3G9 435 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 E2F7Q96AV8 911 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 CDK5RAP3Q96JB5 506 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 PNMA5Q96PV4 448 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 LMAN1LQ9HAT1 526 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 LARSQ9P2J5 1176 aaKnown RBP17■□□□□ 0.31
LINC01116-202ENST00000339037 CDV3Q9UKY7 258 aaKnown RBP17■□□□□ 0.31
LINC01116-202ENST00000339037 RAB23Q9ULC3 237 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 USP18Q9UMW8 372 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 UBQLN1Q9UMX0 589 aaKnown RBP17■□□□□ 0.31
LINC01116-202ENST00000339037 KIF3AQ9Y496 699 aa17■□□□□ 0.31
LINC01116-202ENST00000339037 NCANO14594 1321 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 A0A1W2PRU2 124 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 OR6C75A6NL08 312 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 HEPACAM2A8MVW5 462 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 PRR5-ARHGAP8B1AHC4 643 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 ARNTLO00327 626 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 HNRNPDLO14979 420 aaKnown RBP16.99■□□□□ 0.31
LINC01116-202ENST00000339037 XPOTO43592 962 aaKnown RBP16.99■□□□□ 0.31
LINC01116-202ENST00000339037 OR4Q2P0C623 313 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 PLA2G4BP0C869 781 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 CYP3A5P20815 502 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 CCNE1P24864 410 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 EPHB3P54753 998 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 SLC12A3P55017 1021 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 ARHGAP8P85298 464 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 ATP2C1P98194 919 aaPredicted RBP16.99■□□□□ 0.31
LINC01116-202ENST00000339037 DUSP4Q13115 394 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 GPR17Q13304 367 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 CAMK2BQ13554 666 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 ZBTB6Q15916 424 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 MCTP1Q6DN14 999 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 YAF2Q8IY57 180 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 CSGALNACT1Q8TDX6 532 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 MSANTD3Q96H12 275 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 PLIN2Q99541 437 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 HAPLN2Q9GZV7 340 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 CRISPLD1Q9H336 500 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 COL4A2P08572 1712 aa16.99■□□□□ 0.31
LINC01116-202ENST00000339037 VWA3AA6NCI4 1184 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
LINC01116-202ENST00000339037 VNN2O95498 520 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 TNFSF9P41273 254 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 ALDH1A3P47895 512 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 LIG4P49917 911 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 NCKAP1LP55160 1127 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 MLLT6P55198 1093 aaPredicted RBP16.98■□□□□ 0.31
LINC01116-202ENST00000339037 FCHO2Q0JRZ9 810 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 RABEP1Q15276 862 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 KYAT1Q16773 422 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 OVOS1Q6IE37 1185 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 C1orf228Q6PIY5 440 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 DSTYKQ6XUX3 929 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 TMC8Q8IU68 726 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 TMEM121BQ9BXQ6 578 aaPredicted RBP16.98■□□□□ 0.31
LINC01116-202ENST00000339037 DNAJC25Q9H1X3 360 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 TICRRQ7Z2Z1 1910 aa16.98■□□□□ 0.31
LINC01116-202ENST00000339037 NPHP3-ACAD11A0A0J9YXS1 232 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 LACTBL1A8MY62 500 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 CHRNB1P11230 501 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 CXCL12P48061 93 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 GUCY2FP51841 1108 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 KPNA1P52294 538 aaPredicted RBP16.97■□□□□ 0.31
LINC01116-202ENST00000339037 ATXN1P54253 815 aaKnown RBP16.97■□□□□ 0.31
LINC01116-202ENST00000339037 LRRC32Q14392 662 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 ENOX2Q16206 610 aaKnown RBP16.97■□□□□ 0.31
LINC01116-202ENST00000339037 LPAL2Q16609 132 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 PPP1R15BQ5SWA1 713 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 STXBP5Q5T5C0 1151 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 LAIR1Q6GTX8 287 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 HAUS6Q7Z4H7 955 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 CELF5Q8N6W0 485 aaKnown RBP16.97■□□□□ 0.31
LINC01116-202ENST00000339037 RSPRY1Q96DX4 576 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 DCBLD2Q96PD2 775 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 LRRC3Q9BY71 257 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 ODF2LQ9ULJ1 636 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 BOLA1Q9Y3E2 137 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 LAMA1P25391 3075 aa16.97■□□□□ 0.31
LINC01116-202ENST00000339037 MTMR11A4FU01 709 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 SLC38A8A6NNN8 435 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 OGTO15294 1046 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 CHADO15335 359 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 FAM189A1O60320 539 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 ODC1P11926 461 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 TYMPP19971 482 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 SCP2P22307 547 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 TGM1P22735 817 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 SATB1Q01826 763 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 MYBPC2Q14324 1141 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 GAS6Q14393 721 aa16.96■□□□□ 0.31
LINC01116-202ENST00000339037 TMEM119Q4V9L6 283 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms