RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 CDH23Q9H251 3354 aa16.52■□□□□ 0.24
SEC13-201ENST00000337354 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 H7C4K7 107 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 I3L4J1 428 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 LILRB3O75022 631 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 OAZ2O95190 189 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 ASS1P00966 412 aaKnown RBP16.51■□□□□ 0.23
SEC13-201ENST00000337354 CYP11A1P05108 521 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 P4HA1P13674 534 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 MRPL58Q14197 206 aaKnown RBP16.51■□□□□ 0.23
SEC13-201ENST00000337354 ZNF699Q32M78 642 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 WDR44Q5JSH3 913 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 SCARA3Q6AZY7 606 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 METTL23Q86XA0 190 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 TMEM86AQ8N2M4 240 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 TOP6BLQ8N6T0 577 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 NDST4Q9H3R1 872 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 RXFP1Q9HBX9 757 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 SNX9Q9Y5X1 595 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 PLXNA4Q9HCM2 1894 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 GTPBP10A4D1E9 387 aaKnown RBP16.51■□□□□ 0.23
SEC13-201ENST00000337354 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
SEC13-201ENST00000337354 TNNC1P63316 161 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 MYL7Q01449 175 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 YWHAHQ04917 246 aaPredicted RBP16.51■□□□□ 0.23
SEC13-201ENST00000337354 PTPN14Q15678 1187 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 HSP90AA4PQ58FG1 418 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 ZNF667Q5HYK9 610 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 RTP2Q5QGT7 225 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 LNX1Q8TBB1 728 aaPredicted RBP16.51■□□□□ 0.23
SEC13-201ENST00000337354 RIN2Q8WYP3 895 aaPredicted RBP16.51■□□□□ 0.23
SEC13-201ENST00000337354 EMILIN2Q9BXX0 1053 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 HSD3B7Q9H2F3 369 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 FNIP2Q9P278 1114 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 LIMA1Q9UHB6 759 aaKnown RBP16.51■□□□□ 0.23
SEC13-201ENST00000337354 BACE2Q9Y5Z0 518 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 MTCH2Q9Y6C9 303 aa16.51■□□□□ 0.23
SEC13-201ENST00000337354 FSD2A1L4K1 749 aa16.5■□□□□ 0.23
SEC13-201ENST00000337354 C2orf71A6NGG8 1288 aa16.5■□□□□ 0.23
SEC13-201ENST00000337354 C1RP00736 705 aa16.5■□□□□ 0.23
SEC13-201ENST00000337354 IRS1P35568 1242 aa16.5■□□□□ 0.23
SEC13-201ENST00000337354 CCDC85BQ15834 202 aaPredicted RBP16.5■□□□□ 0.23
SEC13-201ENST00000337354 VARS2Q5ST30 1063 aaKnown RBP16.5■□□□□ 0.23
SEC13-201ENST00000337354 LIMS2Q7Z4I7 341 aa16.5■□□□□ 0.23
SEC13-201ENST00000337354 THEM5Q8N1Q8 247 aa16.5■□□□□ 0.23
SEC13-201ENST00000337354 EHBP1Q8NDI1 1231 aa16.5■□□□□ 0.23
SEC13-201ENST00000337354 FAM124BQ9H5Z6 455 aaPredicted RBP16.5■□□□□ 0.23
SEC13-201ENST00000337354 NSUN3Q9H649 340 aaKnown RBP16.5■□□□□ 0.23
SEC13-201ENST00000337354 PRRC2BQ5JSZ5 2229 aaKnown RBP16.49■□□□□ 0.23
SEC13-201ENST00000337354 C2CD2LO14523 706 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 TACC1O75410 805 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 CSPG5O95196 566 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 LHX1P48742 406 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 KRT31Q15323 416 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 SOWAHAQ2M3V2 549 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 MIIPQ5JXC2 388 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 PLPP4Q5VZY2 271 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 OVOS1Q6IE37 1185 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 ZNF280DQ6N043 979 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 LUZP1Q86V48 1076 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 SEMA4DQ92854 862 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 B3GALT6Q96L58 329 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 MMS19Q96T76 1030 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 CDCA3Q99618 268 aaPredicted RBP16.49■□□□□ 0.23
SEC13-201ENST00000337354 MTRRQ9UBK8 725 aa16.49■□□□□ 0.23
SEC13-201ENST00000337354 NXF1Q9UBU9 619 aaKnown RBP16.49■□□□□ 0.23
SEC13-201ENST00000337354 TIMM13Q9Y5L4 95 aaPredicted RBP16.49■□□□□ 0.23
SEC13-201ENST00000337354 TDRD15B5MCY1 1934 aaKnown RBP16.48■□□□□ 0.23
SEC13-201ENST00000337354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.48■□□□□ 0.23
SEC13-201ENST00000337354 GABRDO14764 452 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 NCK2O43639 380 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 CLSTN1O94985 981 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
SEC13-201ENST00000337354 PSMD5Q16401 504 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 WSCD1Q658N2 575 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 GBP6Q6ZN66 633 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 PPFIBP1Q86W92 1011 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 PDCL2Q8N4E4 241 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 LMO3Q8TAP4 145 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 KLHL5Q96PQ7 755 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 PI4K2AQ9BTU6 479 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 CYP3A43Q9HB55 503 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 L1RE1Q9UN81 338 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 CITO14578 2027 aa16.48■□□□□ 0.23
SEC13-201ENST00000337354 OR6C75A6NL08 312 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 HIDE1A8MVS5 230 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 TBC1D4O60343 1298 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 ADH1AP07327 375 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 CNPP09543 421 aaKnown RBP16.47■□□□□ 0.23
SEC13-201ENST00000337354 CA8P35219 290 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 NDUFV1P49821 464 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 COPB1P53618 953 aaKnown RBP16.47■□□□□ 0.23
SEC13-201ENST00000337354 SKIV2LQ15477 1246 aaKnown RBP16.47■□□□□ 0.23
SEC13-201ENST00000337354 EXOC3L4Q17RC7 722 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 CTXN3Q4LDR2 81 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 FKBP15Q5T1M5 1219 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 SMYD5Q6GMV2 418 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 SLC8B1Q6J4K2 584 aa16.47■□□□□ 0.23
SEC13-201ENST00000337354 PRSS55Q6UWB4 352 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms