RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 APBB2Q92870 758 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 MAP4K1Q92918 833 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ACSBG1Q96GR2 724 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TMEM79Q9BSE2 394 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 VPS33BQ9H267 617 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 RXFP1Q9HBX9 757 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 INTS13Q9NVM9 706 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ARHGEF38Q9NXL2 777 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 MYRFQ9Y2G1 1151 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ATP7AQ04656 1500 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 DDHD2O94830 711 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 LDHAP00338 332 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 SLC16A1P53985 500 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 RAD23AP54725 363 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 LRRC74AQ0VAA2 488 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 WASHC2DQ5SRD0 308 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 MFSD4BQ5TF39 518 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 CAPSLQ8WWF8 208 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 HEMGNQ9BXL5 484 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TIMMDC1Q9NPL8 285 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ZBTB1Q9Y2K1 713 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ATP5BP06576 529 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TCN1P20061 433 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 KIAA1841Q6NSI8 718 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PEG10Q86TG7 708 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 CYP4Z1Q86W10 505 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 SH2D3CQ8N5H7 860 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 GANCQ8TET4 914 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 SERPINB12Q96P63 405 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 A0A1W2PP64 1363 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PLEKHG1Q9ULL1 1385 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 FAM92AA1XBS5 289 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 RNMTO43148 476 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 JAK3P52333 1124 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ACTR2P61160 394 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 EXOSC10Q01780 885 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 CYP51A1Q16850 503 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 SLC25A24Q6NUK1 477 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 DPP8Q6V1X1 898 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 CENPTQ96BT3 561 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 A0A0B4J269 797 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 STX11O75558 287 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 FGAP02671 866 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TNFAIP2Q03169 654 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TUBB3Q13509 450 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 KCNT1Q5JUK3 1230 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 C7orf31Q8N865 590 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 SHCBP1Q8NEM2 672 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 DGCR14Q96DF8 476 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 PGBD4Q96DM1 585 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 BDH2Q9BUT1 245 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 ADD3Q9UEY8 706 aaKnown RBP6.44□□□□□ -1.38
CSMD1-201ENST00000335551 TMCC3Q9ULS5 477 aa6.44□□□□□ -1.38
CSMD1-201ENST00000335551 WDR62O43379 1518 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 NCK2O43639 380 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CCDC130P13994 396 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 LRRC41Q15345 812 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 E4F1Q66K89 784 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 LIN54Q6MZP7 749 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 RORBQ92753 470 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 DCUN1D1Q96GG9 259 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CCDC28BQ9BUN5 200 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 EURLQ9NYK6 297 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 MAPRE3Q9UPY8 281 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 HEATR1Q9H583 2144 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 C1orf232A0A0U1RR37 186 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SNRPAP09012 282 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 HNMTP50135 292 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 IRGCQ6NXR0 463 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 WDR60Q8WVS4 1066 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 PTPRN2Q92932 1015 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 FAM89AQ96GI7 184 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 PDLIM2Q96JY6 352 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 LINC00854A0A1B0GVQ3 168 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 EXTL3O43909 919 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 KRT34O76011 436 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 HIST1H2AGP0C0S8 130 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 POTEIP0CG38 1075 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 HIST1H2ADP20671 130 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 SPRP35270 261 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ZAP70P43403 619 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 UBE3CQ15386 1083 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 ZBTB49Q6ZSB9 765 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 MYCBPAPQ8TBZ2 947 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 HIST1H2AHQ96KK5 128 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 HIST1H2AJQ99878 128 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 H2AFJQ9BTM1 129 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 POLR1BQ9H9Y6 1135 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 PCDHB8Q9UN66 801 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 UBA6A0AVT1 1052 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 THRAP10827 490 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 QARSP47897 775 aaKnown RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 HSD17B4P51659 736 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 FBXO42Q6P3S6 717 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 CENPLQ8N0S6 344 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-201ENST00000335551 IP6K1Q92551 441 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 AP3S1Q92572 193 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 LRRC1Q9BTT6 524 aa6.43□□□□□ -1.38
CSMD1-201ENST00000335551 TAGLN3Q9UI15 199 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms