RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SOWAHAQ2M3V2 549 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 TIGD5Q53EQ6 642 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 WDR59Q6PJI9 974 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 HERC6Q8IVU3 1022 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 JAKMIP2Q96AA8 810 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 RNPC3Q96LT9 517 aaKnown RBP23.04■■□□□ 1.28
TPM1-204ENST00000334895 YME1L1Q96TA2 773 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 TMEM175Q9BSA9 504 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 MARCH5Q9NX47 278 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 KIAA1671Q9BY89 1806 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 GALTP07902 379 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 HNRNPH3P31942 346 aaKnown RBP23.03■■□□□ 1.28
TPM1-204ENST00000334895 SOX5P35711 763 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 BRCC3P46736 316 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 FAM71AQ8IYT1 594 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 PHOSPHO2Q8TCD6 241 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 MMS19Q96T76 1030 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 CYP3A43Q9HB55 503 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 CISHQ9NSE2 258 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 AIPL1Q9NZN9 384 aa23.03■■□□□ 1.28
TPM1-204ENST00000334895 MRPL42Q9Y6G3 142 aaKnown RBP23.03■■□□□ 1.28
TPM1-204ENST00000334895 TSC2P49815 1807 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 I3L4J1 428 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 PTMAP06454 111 aaKnown RBP23.02■■□□□ 1.28
TPM1-204ENST00000334895 P4HA1P13674 534 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 ATP2A2P16615 1042 aaKnown RBP23.02■■□□□ 1.28
TPM1-204ENST00000334895 CD58P19256 250 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 STAT1P42224 750 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 BTG3Q14201 252 aaPredicted RBP23.02■■□□□ 1.28
TPM1-204ENST00000334895 SFMBT2Q5VUG0 894 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 TMEM173Q86WV6 379 aaPredicted RBP23.02■■□□□ 1.28
TPM1-204ENST00000334895 SYN2Q92777 582 aaPredicted RBP23.02■■□□□ 1.28
TPM1-204ENST00000334895 SENP8Q96LD8 212 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 PANX2Q96RD6 677 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 MRPL45Q9BRJ2 306 aaKnown RBP23.02■■□□□ 1.28
TPM1-204ENST00000334895 MTIF3Q9H2K0 278 aaKnown RBP23.02■■□□□ 1.28
TPM1-204ENST00000334895 L1RE1Q9UN81 338 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 CNTN6Q9UQ52 1028 aa23.02■■□□□ 1.28
TPM1-204ENST00000334895 GFPT2O94808 682 aa23.01■■□□□ 1.27
TPM1-204ENST00000334895 FECHP22830 423 aa23.01■■□□□ 1.27
TPM1-204ENST00000334895 DEKP35659 375 aaKnown RBP23.01■■□□□ 1.27
TPM1-204ENST00000334895 BCAR1P56945 870 aa23.01■■□□□ 1.27
TPM1-204ENST00000334895 IRF2BP2Q7Z5L9 587 aa23.01■■□□□ 1.27
TPM1-204ENST00000334895 TMEM139Q8IV31 216 aa23.01■■□□□ 1.27
TPM1-204ENST00000334895 LRRC8AQ8IWT6 810 aa23.01■■□□□ 1.27
TPM1-204ENST00000334895 BCL7CQ8WUZ0 217 aaPredicted RBP23.01■■□□□ 1.27
TPM1-204ENST00000334895 KBTBD7Q8WVZ9 684 aa23.01■■□□□ 1.27
TPM1-204ENST00000334895 NME7Q9Y5B8 376 aa23.01■■□□□ 1.27
TPM1-204ENST00000334895 NT5C1B-RDH14C9J2C7 533 aa23■■□□□ 1.27
TPM1-204ENST00000334895 CYB561D2O14569 222 aa23■■□□□ 1.27
TPM1-204ENST00000334895 ALDH2P05091 517 aa23■■□□□ 1.27
TPM1-204ENST00000334895 LINC00271P0C7V0 271 aa23■■□□□ 1.27
TPM1-204ENST00000334895 ZNF132P52740 706 aa23■■□□□ 1.27
TPM1-204ENST00000334895 INCA1Q0VD86 236 aa23■■□□□ 1.27
TPM1-204ENST00000334895 MEA1Q16626 185 aa23■■□□□ 1.27
TPM1-204ENST00000334895 HGSNATQ68CP4 663 aa23■■□□□ 1.27
TPM1-204ENST00000334895 WHAMMQ8TF30 809 aa23■■□□□ 1.27
TPM1-204ENST00000334895 NUCKS1Q9H1E3 243 aaKnown RBP23■■□□□ 1.27
TPM1-204ENST00000334895 HMGXB4Q9UGU5 601 aa23■■□□□ 1.27
TPM1-204ENST00000334895 FAN1Q9Y2M0 1017 aa23■■□□□ 1.27
TPM1-204ENST00000334895 PCDHB4Q9Y5E5 795 aa23■■□□□ 1.27
TPM1-204ENST00000334895 M0QZQ0 153 aa23■■□□□ 1.27
TPM1-204ENST00000334895 CLCN1P35523 988 aa23■■□□□ 1.27
TPM1-204ENST00000334895 ARID5AQ03989 594 aa23■■□□□ 1.27
TPM1-204ENST00000334895 TMEM270Q6UE05 265 aa23■■□□□ 1.27
TPM1-204ENST00000334895 PDCL2Q8N4E4 241 aa23■■□□□ 1.27
TPM1-204ENST00000334895 TOP6BLQ8N6T0 577 aa23■■□□□ 1.27
TPM1-204ENST00000334895 SUSD3Q96L08 255 aa23■■□□□ 1.27
TPM1-204ENST00000334895 TWNKQ96RR1 684 aa23■■□□□ 1.27
TPM1-204ENST00000334895 KCNF1Q9H3M0 494 aa23■■□□□ 1.27
TPM1-204ENST00000334895 ACP6Q9NPH0 428 aa23■■□□□ 1.27
TPM1-204ENST00000334895 INSL6Q9Y581 213 aa23■■□□□ 1.27
TPM1-204ENST00000334895 CYP26A1O43174 497 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 CILPO75339 1184 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 TACC1O75410 805 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 SKILP12757 684 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 KRT5P13647 590 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 USP8P40818 1118 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 ASIC2Q16515 512 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 WSCD1Q658N2 575 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 FAM109BQ6ICB4 259 aaPredicted RBP22.99■■□□□ 1.27
TPM1-204ENST00000334895 DSTYKQ6XUX3 929 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 APPL2Q8NEU8 664 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 SP7Q8TDD2 431 aaPredicted RBP22.99■■□□□ 1.27
TPM1-204ENST00000334895 ZBED2Q9BTP6 218 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 COLEC11Q9BWP8 271 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 ADAM28Q9UKQ2 775 aa22.99■■□□□ 1.27
TPM1-204ENST00000334895 A0A1W2PPC1 479 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 LCHNA4D1U4 455 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 HCRTO43612 131 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 HUS1O60921 280 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 CALCAP01258 141 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 PLEKP08567 350 aaPredicted RBP22.98■■□□□ 1.27
TPM1-204ENST00000334895 FERP16591 822 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 PAX3P23760 479 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 DPH6Q7L8W6 267 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 OSTM1Q86WC4 334 aa22.98■■□□□ 1.27
TPM1-204ENST00000334895 RBBP8NLQ8NC74 664 aaPredicted RBP22.98■■□□□ 1.27
TPM1-204ENST00000334895 ZNF830Q96NB3 372 aaPredicted RBP22.98■■□□□ 1.27
TPM1-204ENST00000334895 RAD9AQ99638 391 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms