RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 RHEBQ15382 184 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZCCHC8Q6NZY4 707 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 DHX40Q8IX18 779 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLFN12Q8IYM2 578 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF283Q8N7M2 679 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZBTB18Q99592 522 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 FOXP3Q9BZS1 431 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ADAM21Q9UKJ8 722 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SQORQ9Y6N5 450 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ERBB3P21860 1342 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 NPIPA5A0A0B4J1W7 369 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 RNASEH2AO75792 299 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC5A1P13866 664 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CASP5P51878 434 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 STRIP1Q5VSL9 837 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 KRT39Q6A163 491 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 HEATR4Q86WZ0 1026 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 MOB1AQ9H8S9 216 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 DENND2AQ9ULE3 1009 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 DOCK9Q9BZ29 2069 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PRKCAP17252 672 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ETV1P50549 477 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZSCAN25Q6NSZ9 544 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 KLHL17Q6TDP4 642 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CRTC1Q6UUV9 634 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 DPH6Q7L8W6 267 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 GRAMD1CQ8IYS0 662 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 FAM162AQ96A26 154 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CCDC74AQ96AQ1 378 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CNNM1Q9NRU3 951 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 MCM9Q9NXL9 1143 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SIX4Q9UIU6 781 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 AIM2O14862 343 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ANXA1P04083 346 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 HARS2P49590 506 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 EAPPQ56P03 285 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PCID2Q5JVF3 399 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 LIN54Q6MZP7 749 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CHAC2Q8WUX2 184 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 BORCS5Q969J3 196 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 FAM212AQ96EL1 285 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PAIP1Q9H074 479 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 GAREM1Q9H706 876 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 NRBP2Q9NSY0 501 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 TBCCD1Q9NVR7 557 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 GIN1Q9NXP7 522 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ICKQ9UPZ9 632 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 G3V2T6 193 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 M0R2C6 588 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CLPTM1O96005 669 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PDE1AP54750 535 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CCDC85BQ15834 202 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PKN1Q16512 942 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 NET1Q7Z628 596 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ACOT12Q8WYK0 555 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 DLG3Q92796 817 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SEC31BQ9NQW1 1179 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 VPS45Q9NRW7 570 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PIK3R4Q99570 1358 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PDS5AQ29RF7 1337 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 KIF28PB7ZC32 967 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 RTN3O95197 1032 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ADAP00813 363 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 CHRNB1P11230 501 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ACADMP11310 421 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 ACLYP53396 1101 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SRSF11Q05519 484 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SMIM5Q71RC9 77 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 KRT25Q7Z3Z0 450 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 SETD3Q86TU7 594 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 C12orf43Q96C57 262 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 DCLRE1BQ9H816 532 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 PNPLA8Q9NP80 782 aa6.33□□□□□ -1.4
CDC42BPA-201ENST00000334218 A0A1W2PRQ8 180 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZBTB11O95625 1053 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 LDHCP07864 332 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ECHS1P30084 290 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 DGCR6Q14129 220 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 GPR158Q5T848 1215 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 P3H2Q8IVL5 708 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 KCNV2Q8TDN2 545 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATL1Q8WXF7 558 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 SLC4A9Q96Q91 983 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 IMPAD1Q9NX62 359 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 RPS6KA6Q9UK32 745 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 COG6Q9Y2V7 657 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ATP5J2-PTCD1G3V325 749 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 TGM6O95932 706 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 FGFR1P11362 822 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 EPCAMP16422 314 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 HOXB6P17509 224 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 CA9Q16790 459 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 TMTC4Q5T4D3 741 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 C6orf52Q5T4I8 152 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 PPP1R2P3Q6NXS1 205 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 HPS6Q86YV9 775 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 ZNF710Q8N1W2 664 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 KIF2BQ8N4N8 673 aa6.32□□□□□ -1.4
CDC42BPA-201ENST00000334218 POLR3BQ9NW08 1133 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms