RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 AMPD1P23109 780 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 HIRAP54198 1017 aaPredicted RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 PLOD1Q02809 727 aaPredicted RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 PPIDQ08752 370 aaKnown RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 ZDHHC24Q6UX98 284 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 TSHZ1Q6ZSZ6 1077 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 ASRGL1Q7L266 308 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 GSTA5Q7RTV2 222 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 C1orf131Q8NDD1 294 aaKnown RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 ZSWIM2Q8NEG5 633 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 MAML1Q92585 1016 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 PGM2Q96G03 612 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 NAP1L4Q99733 375 aaKnown RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 KLHL4Q9C0H6 718 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 LRMDAQ9H2I8 198 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 EBF3Q9H4W6 596 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 KCNQ5Q9NR82 932 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 AGPAT3Q9NRZ7 376 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 TMEM150BA6NC51 233 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 SERPINB2P05120 415 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 EIF2B2P49770 351 aaKnown RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 ATXN3P54252 364 aaPredicted RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 LSAMPQ13449 338 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 WASHC2DQ5SRD0 308 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 PPP1R18Q6NYC8 613 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 C1orf228Q6PIY5 440 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 C4orf50Q6ZRC1 276 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 RNF207Q6ZRF8 634 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 SLFN11Q7Z7L1 901 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 COL23A1Q86Y22 540 aaPredicted RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 DCUN1D5Q9BTE7 237 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 EFR3BQ9Y2G0 817 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 RPTORQ8N122 1335 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 E7ENQ6 273 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 CES2O00748 559 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 XPO1O14980 1071 aaKnown RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 FOXD2O60548 495 aaPredicted RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 TROVE2P10155 538 aaKnown RBP eCLIP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 JAM2P57087 298 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 SP4Q02446 784 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 KRT17Q04695 432 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 MPP2Q14168 576 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 TRIP10Q15642 601 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 LPCAT4Q643R3 524 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 KRT27Q7Z3Y8 459 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 IFNLR1Q8IU57 520 aaPredicted RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 SLC7A5P1Q8MH63 180 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 CERS5Q8N5B7 392 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 PYDC1Q8WXC3 89 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 CDC42EP4Q9H3Q1 356 aaKnown RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 SYNCQ9H7C4 482 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 CYP4F11Q9HBI6 524 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 ZDHHC18Q9NUE0 388 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 KLHL11Q9NVR0 708 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.5□□□□□ -0.41
LIMK2-202ENST00000333611 SYNGAP1Q96PV0 1343 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 DOT1LQ8TEK3 1739 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 FAM187AA6NFU0 413 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 RIPK2O43353 540 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 SORBS3O60504 671 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 ASMTLO95671 621 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 EYA4O95677 639 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 PTPN4P29074 926 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CDK7P50613 346 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 GPC5P78333 572 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 WDR72Q3MJ13 1102 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 LLGL2Q6P1M3 1020 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 STXBP4Q6ZWJ1 553 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 ETNPPLQ8TBG4 499 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 ZNF564Q8TBZ8 553 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 TEKT1Q969V4 418 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CBWD1Q9BRT8 395 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 FBXO6Q9NRD1 293 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 HEY2Q9UBP5 337 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 MYO3BQ8WXR4 1341 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 B2RBV5 119 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 RNASEH1O60930 286 aaKnown RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 GH2P01242 217 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 KITP10721 976 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CHRNA3P32297 505 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 FOXN2P32314 431 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 TTLL12Q14166 644 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 KIF22Q14807 665 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 KAZNQ674X7 775 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 GIPC3Q8TF64 312 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CKAP2Q8WWK9 683 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 ZSWIM1Q9BR11 485 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 CCDC77Q9BR77 488 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 VPS37BQ9H9H4 285 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 HOMER2Q9NSB8 354 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 ATF5Q9Y2D1 282 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 PFASO15067 1338 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 DDTLA6NHG4 134 aaPredicted RBP12.49□□□□□ -0.41
LIMK2-202ENST00000333611 BTNL10A8MVZ5 291 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 WFS1O76024 890 aa12.49□□□□□ -0.41
LIMK2-202ENST00000333611 S100BP04271 92 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms