RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 CREB1P16220 341 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 NR1H3Q13133 447 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 RHBDF2Q6PJF5 856 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ERICH1Q86X53 443 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 KLHL29Q96CT2 875 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PITPNM3Q9BZ71 974 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 SPATA31C2B4DYI2 1134 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 C19orf81C9J6K1 198 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 O00370 1275 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 EGFRP00533 1210 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 GLRA2P23416 452 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 AP3M2P53677 418 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 TFAMQ00059 246 aaKnown RBP12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 SETDB1Q15047 1291 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 E2F5Q15329 346 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 HP1BP3Q5SSJ5 553 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PLEKHA7Q6IQ23 1121 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ZBED3Q96IU2 234 aaPredicted RBP12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 NUB1Q9Y5A7 615 aa12.38□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 TMEM191BP0C7N4 346 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 RPS12P25398 132 aaKnown RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 IVDP26440 423 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 LACTBP83111 547 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 TMEM132BQ14DG7 1078 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 DALRD3Q5D0E6 543 aaKnown RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 FAM160B1Q5W0V3 765 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ZBTB8OSQ8IWT0 167 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 HERPUD2Q9BSE4 406 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 APOBEC3GQ9HC16 384 aaKnown RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ABCF3Q9NUQ8 709 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 VNN1O95497 513 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 CFHP08603 1231 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 CENPUQ71F23 418 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 RIBC1Q8N443 379 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 OR5B17Q8NGF7 314 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 FBF1Q8TES7 1133 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 MTFR1LQ9H019 292 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PDLIM7Q9NR12 457 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ZNF214Q9UL59 606 aaPredicted RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 FAM47DPA6NHR8 397 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 RGS20O76081 388 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 SRGAP2CP0DJJ0 459 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PTPRAP18433 802 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 RPL7AP62424 266 aaKnown RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PRKG1Q13976 671 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 DUOXA2Q1HG44 320 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 SCARA5Q6ZMJ2 495 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PRUNE1Q86TP1 453 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 CKAP2Q8WWK9 683 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 TBC1D31Q96DN5 1066 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 DNPEPQ9ULA0 475 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 TPX2Q9ULW0 747 aaKnown RBP12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 TELO2Q9Y4R8 837 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 BRWD3Q6RI45 1802 aa12.37□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 UMODL1Q5DID0 1318 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 A0A0B4J269 797 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 GOLGA8SH3BPF8 625 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 UBOX5O94941 541 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ACO1P21399 889 aaKnown RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 RFC5P40937 340 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 CLDN10P78369 228 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 MCL1Q07820 350 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 KLF1Q13351 362 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ATP13A4Q4VNC1 1196 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ZBTB41Q5SVQ8 909 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 MFSD7Q6UXD7 560 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 FAM47EQ6ZV65 393 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ZBED8Q8IZ13 594 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 MRPL4Q9BYD3 311 aaKnown RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 FOXO6A8MYZ6 492 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 KRT19P08727 400 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 GMPSP49915 693 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 STAT5BP51692 787 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 EFNA5P52803 228 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 DYNLT1P63172 113 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 TAP1Q03518 808 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PIGHQ14442 188 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 HADHQ16836 314 aaKnown RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 TNFAIP8L3Q5GJ75 292 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 MAGEB18Q96M61 343 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 DDX56Q9NY93 547 aaKnown RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 IVNS1ABPQ9Y6Y0 642 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 PTPRJQ12913 1337 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 STBD1O95210 358 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 GH1P01241 217 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 MMP8P22894 467 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 BRD2P25440 801 aaKnown RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 ALDH3A1P30838 453 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 MCCD1P59942 119 aaPredicted RBP12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 NEDD9Q14511 834 aa12.36□□□□□ -0.43
CSPG4P4Y-201ENST00000333235 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms