RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PLXNA3P51805 1871 aa22.06■■□□□ 1.12
MRPL40-201ENST00000333130 CYB561D2O14569 222 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 C1RP00736 705 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 ATICP31939 592 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 GTF2H1P32780 548 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 GTF2F1P35269 517 aaKnown RBP eCLIP22.05■■□□□ 1.12
MRPL40-201ENST00000333130 ZNF165P49910 485 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 ZNF445P59923 1031 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 ADAM15Q13444 863 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 COL19A1Q14993 1142 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 CTXN3Q4LDR2 81 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 DCAF17Q5H9S7 520 aaPredicted RBP22.05■■□□□ 1.12
MRPL40-201ENST00000333130 OVOS1Q6IE37 1185 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 LLGL2Q6P1M3 1020 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 LRSAM1Q6UWE0 723 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 TRIM59Q8IWR1 403 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 CCDC150Q8NCX0 1101 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 SLC35C1Q96A29 364 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 FAM84AQ96KN4 292 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 DZANK1Q9NVP4 752 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 HCFC2Q9Y5Z7 792 aa22.05■■□□□ 1.12
MRPL40-201ENST00000333130 SPTLC1O15269 473 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 TRIM49P0CI25 452 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 TRIM49CP0CI26 452 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 PIK3CAP42336 1068 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 CTC1Q2NKJ3 1217 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 CDKAL1Q5VV42 579 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 TDRD10Q5VZ19 366 aaKnown RBP22.04■■□□□ 1.12
MRPL40-201ENST00000333130 C15orf39Q6ZRI6 1047 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 GLYCTKQ8IVS8 523 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 DHX40Q8IX18 779 aaKnown RBP22.04■■□□□ 1.12
MRPL40-201ENST00000333130 CNOT6LQ96LI5 555 aaKnown RBP22.04■■□□□ 1.12
MRPL40-201ENST00000333130 PRUNE2Q8WUY3 3088 aa22.04■■□□□ 1.12
MRPL40-201ENST00000333130 SLC34A2O95436 690 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 C4BPAP04003 597 aaKnown RBP22.03■■□□□ 1.12
MRPL40-201ENST00000333130 CYP11A1P05108 521 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 P4HA1P13674 534 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 RPL17P18621 184 aaKnown RBP22.03■■□□□ 1.12
MRPL40-201ENST00000333130 KCNA5P22460 613 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 CLCN4P51793 760 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 TNNC1P63316 161 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 PPP3CAQ08209 521 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 NCOA4Q13772 614 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 ZACNQ401N2 412 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 FAM114A1Q8IWE2 563 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 THEM5Q8N1Q8 247 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 TMEM86AQ8N2M4 240 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 AOPEPQ8N6M6 819 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 SPATA18Q8TC71 538 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 HSD3B7Q9H2F3 369 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 MMRN2Q9H8L6 949 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 TMEM8AQ9HCN3 771 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 SAMSN1Q9NSI8 373 aaKnown RBP22.03■■□□□ 1.12
MRPL40-201ENST00000333130 GDAP2Q9NXN4 497 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 SNX9Q9Y5X1 595 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 CDY1Q9Y6F8 540 aa22.03■■□□□ 1.12
MRPL40-201ENST00000333130 OR6C75A6NL08 312 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 OAZ2O95190 189 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 OR1D2P34982 312 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 GCLMP48507 274 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 MXI1P50539 228 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 IQCB1Q15051 598 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 ZNF699Q32M78 642 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 KRT39Q6A163 491 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 TMEM184AQ6ZMB5 413 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 SV2AQ7L0J3 742 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 TOP6BLQ8N6T0 577 aa22.02■■□□□ 1.12
MRPL40-201ENST00000333130 TIMM13Q9Y5L4 95 aaPredicted RBP22.02■■□□□ 1.12
MRPL40-201ENST00000333130 LINC01565O15544 149 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 STAU1O95793 577 aaKnown RBP22.01■■□□□ 1.11
MRPL40-201ENST00000333130 CPB1P15086 417 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 HOXB8P17481 243 aaPredicted RBP22.01■■□□□ 1.11
MRPL40-201ENST00000333130 MRPL58Q14197 206 aaKnown RBP22.01■■□□□ 1.11
MRPL40-201ENST00000333130 SCARA3Q6AZY7 606 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 SLC8B1Q6J4K2 584 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 DPH6Q7L8W6 267 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 PALB2Q86YC2 1186 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 HDAC7Q8WUI4 952 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 TAF4BQ92750 862 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 MMS19Q96T76 1030 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 CLSTN3Q9BQT9 956 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 PLEKHA4Q9H4M7 779 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 FANCLQ9NW38 375 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 BARX2Q9UMQ3 279 aaPredicted RBP22.01■■□□□ 1.11
MRPL40-201ENST00000333130 FAM50BQ9Y247 325 aa22.01■■□□□ 1.11
MRPL40-201ENST00000333130 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22■■□□□ 1.11
MRPL40-201ENST00000333130 N4BP1O75113 896 aaKnown RBP22■■□□□ 1.11
MRPL40-201ENST00000333130 TBX10O75333 385 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 GLP2RO95838 553 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 EPCAMP16422 314 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 ZNF18P17022 549 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 EEF1GP26641 437 aaKnown RBP22■■□□□ 1.11
MRPL40-201ENST00000333130 MYL6P60660 151 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 CETN1Q12798 172 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 RAB33AQ14088 237 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 SGSM1Q2NKQ1 1148 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 WDR72Q3MJ13 1102 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 ZNF667Q5HYK9 610 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 LIN9Q5TKA1 542 aa22■■□□□ 1.11
MRPL40-201ENST00000333130 SLC22A17Q8WUG5 538 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms