RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 LSM8O95777 96 aaKnown RBP18.48■□□□□ 0.55
DDX28-201ENST00000332395 LGALS2P05162 132 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 WEE2P0C1S8 567 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 INSRRP14616 1297 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 ASPAP45381 313 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 EIF3BP55884 814 aaKnown RBP18.48■□□□□ 0.55
DDX28-201ENST00000332395 LAMC2Q13753 1193 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 PPP1R7Q15435 360 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 SCARA5Q6ZMJ2 495 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 CCDC50Q8IVM0 306 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 GPRC5AQ8NFJ5 357 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 SLC10A4Q96EP9 437 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 NFKBIZQ9BYH8 718 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 YY1AP1Q9H869 796 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 CHST7Q9NS84 486 aa18.48■□□□□ 0.55
DDX28-201ENST00000332395 CPP00450 1065 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 CXCL8P10145 99 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 HPDP32754 393 aaPredicted RBP18.47■□□□□ 0.55
DDX28-201ENST00000332395 IFFO1Q0D2I5 559 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 SNX1Q13596 522 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 ZNF792Q3KQV3 632 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 ZNF484Q5JVG2 852 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 AGBL2Q5U5Z8 902 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 TAPT1Q6NXT6 567 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 GTF3C2Q8WUA4 911 aaPredicted RBP18.47■□□□□ 0.55
DDX28-201ENST00000332395 ART4Q93070 314 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 IFT122Q9HBG6 1241 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 USTQ9Y2C2 406 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 NUDT17P0C025 328 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 ADORA2AP29274 412 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 MAN1A1P33908 653 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 GTF2A1P52655 376 aaPredicted RBP18.47■□□□□ 0.55
DDX28-201ENST00000332395 RPL7AP62424 266 aaKnown RBP18.47■□□□□ 0.55
DDX28-201ENST00000332395 CCNA1P78396 465 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 GUCY1A3Q02108 690 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 KRT17Q04695 432 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 KRT71Q3SY84 523 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 TMEM192Q8IY95 271 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 KATNAL2Q8IYT4 538 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 ATG4AQ8WYN0 398 aa18.47■□□□□ 0.55
DDX28-201ENST00000332395 RPF1Q9H9Y2 349 aaKnown RBP18.47■□□□□ 0.55
DDX28-201ENST00000332395 PRMT7Q9NVM4 692 aaPredicted RBP18.47■□□□□ 0.55
DDX28-201ENST00000332395 BCCIPQ9P287 314 aaKnown RBP eCLIP18.47■□□□□ 0.55
DDX28-201ENST00000332395 MGAMO43451 1857 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 PLXNA1Q9UIW2 1896 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 CALB1P05937 261 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 RALAP11233 206 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 PHKA2P46019 1235 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 TMEM35BQ8NCS4 154 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 BCAS4Q8TDM0 211 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 FAM129AQ9BZQ8 928 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 DCLK3Q9C098 648 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 LRRC4CQ9HCJ2 640 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 IP6K2Q9UHH9 426 aa18.46■□□□□ 0.55
DDX28-201ENST00000332395 IL18RAPO95256 599 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 GH1P01241 217 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 SSR1P43307 286 aaKnown RBP18.45■□□□□ 0.54
DDX28-201ENST00000332395 KLF1Q13351 362 aaPredicted RBP18.45■□□□□ 0.54
DDX28-201ENST00000332395 DENND2CQ68D51 928 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 ARFGAP2Q8N6H7 521 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 TFAP2BQ92481 460 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 HEMGNQ9BXL5 484 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 ZNF518BQ9C0D4 1074 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 ZSWIM8A7E2V4 1837 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 PLXNB2O15031 1838 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 TMEM191CA6NGB0 347 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 GPR25O00155 361 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 CSDE1O75534 798 aaKnown RBP18.45■□□□□ 0.54
DDX28-201ENST00000332395 SHBGP04278 402 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 KRT19P08727 400 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 GJC1P36383 396 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 POU5F1BQ06416 359 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 CALCOCO2Q13137 446 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 FAM187BQ17R55 369 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 MAMDC4Q6UXC1 1216 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 EXD1Q8NHP7 514 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 RNF25Q96BH1 459 aaPredicted RBP18.45■□□□□ 0.54
DDX28-201ENST00000332395 RABEP2Q9H5N1 569 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 VTA1Q9NP79 307 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 NXF1Q9UBU9 619 aaKnown RBP18.45■□□□□ 0.54
DDX28-201ENST00000332395 PCDHGC3Q9UN70 934 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 POLIQ9UNA4 740 aa18.45■□□□□ 0.54
DDX28-201ENST00000332395 A0A087WZ62 844 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 TCRBV5S1A1TA0A578 114 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 PDHXO00330 501 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 ZEB2O60315 1214 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 NFICP08651 508 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 EIF4BP23588 611 aaKnown RBP18.44■□□□□ 0.54
DDX28-201ENST00000332395 CDH5P33151 784 aaPredicted RBP18.44■□□□□ 0.54
DDX28-201ENST00000332395 LSP1P33241 339 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 MDH1P40925 334 aaKnown RBP18.44■□□□□ 0.54
DDX28-201ENST00000332395 YWHAEP62258 255 aaKnown RBP18.44■□□□□ 0.54
DDX28-201ENST00000332395 DNAJC24Q6P3W2 148 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 LINC01465Q8N7H1 131 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 PPTC7Q8NI37 304 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 GRK7Q8WTQ7 553 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 AFG1LQ8WV93 481 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 PPP1R16BQ96T49 567 aa18.44■□□□□ 0.54
DDX28-201ENST00000332395 FDXACB1Q9BRP7 624 aaPredicted RBP18.44■□□□□ 0.54
DDX28-201ENST00000332395 OSBPL8Q9BZF1 889 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms