RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 TTC26A0AVF1 554 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 UPP2O95045 317 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 CENPAP49450 140 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 C16orf72Q14CZ0 275 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 TRIM69Q86WT6 500 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 RANBP17Q9H2T7 1088 aaKnown RBP16.14■□□□□ 0.17
PTPN21-201ENST00000328736 KLHL11Q9NVR0 708 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 HACL1Q9UJ83 578 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 SLC25A27O95847 323 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 ATP1A1P05023 1023 aaKnown RBP16.14■□□□□ 0.17
PTPN21-201ENST00000328736 APRTP07741 180 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 NMT1P30419 496 aaKnown RBP16.14■□□□□ 0.17
PTPN21-201ENST00000328736 NCKAP1LP55160 1127 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 RUNX1T1Q06455 604 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 TWF1Q12792 350 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 OSBPL10Q9BXB5 764 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 GPR63Q9BZJ6 419 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 C20orf96Q9NUD7 363 aaPredicted RBP16.14■□□□□ 0.17
PTPN21-201ENST00000328736 PAK5Q9P286 719 aa16.14■□□□□ 0.17
PTPN21-201ENST00000328736 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ZNF185O15231 689 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 MLNP12872 115 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ZNF157P51786 506 aaPredicted RBP16.13■□□□□ 0.17
PTPN21-201ENST00000328736 TMA16Q96EY4 203 aaKnown RBP16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ZNRF3Q9ULT6 936 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 VPS9D1Q9Y2B5 631 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ZNF200P98182 395 aaPredicted RBP16.13■□□□□ 0.17
PTPN21-201ENST00000328736 EMC2Q15006 297 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 KCNK16Q96T55 309 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ARL2BPQ9Y2Y0 163 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 TBX3O15119 743 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 MTSS1O43312 755 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 RGS2P41220 211 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 MRPS15P82914 257 aaKnown RBP16.13■□□□□ 0.17
PTPN21-201ENST00000328736 MAPRE1Q15691 268 aaKnown RBP16.13■□□□□ 0.17
PTPN21-201ENST00000328736 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 NT5C1AQ9BXI3 368 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ZNF609O15014 1411 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 KLHL2O95198 593 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 EFHC1Q5JVL4 640 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 RBBP8NLQ8NC74 664 aaPredicted RBP16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ZNF280CQ8ND82 737 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 TMEM143Q96AN5 459 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 RAB6BQ9NRW1 208 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ADAM21Q9UKJ8 722 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 ADGRG1Q9Y653 693 aa16.13■□□□□ 0.17
PTPN21-201ENST00000328736 LRG1P02750 347 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 POLBP06746 335 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 CPT1AP50416 773 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 ANXA11P50995 505 aaKnown RBP16.12■□□□□ 0.17
PTPN21-201ENST00000328736 BTNL9Q6UXG8 535 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 MCEEQ96PE7 176 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 RBBP8Q99708 897 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 HEATR9A2RTY3 570 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 PCSK7Q16549 785 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 HS6ST3Q8IZP7 471 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 USP13Q92995 863 aaPredicted RBP16.12■□□□□ 0.17
PTPN21-201ENST00000328736 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.12■□□□□ 0.17
PTPN21-201ENST00000328736 CEP152O94986 1710 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 CHRNA5P30532 468 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 KCNK10P57789 538 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 CPA5Q8WXQ8 436 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 FOXP3Q9BZS1 431 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 SCN3BQ9NY72 215 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 SPACA6W5XKT8 324 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 UBE3AQ05086 875 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
PTPN21-201ENST00000328736 CYTH1Q15438 398 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 TTC39BQ5VTQ0 682 aaPredicted RBP16.12■□□□□ 0.17
PTPN21-201ENST00000328736 TDRD10Q5VZ19 366 aaKnown RBP16.12■□□□□ 0.17
PTPN21-201ENST00000328736 LRIG3Q6UXM1 1119 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 METTL16Q86W50 562 aaKnown RBP16.12■□□□□ 0.17
PTPN21-201ENST00000328736 KRT78Q8N1N4 520 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 PRMT1Q99873 361 aaKnown RBP16.12■□□□□ 0.17
PTPN21-201ENST00000328736 YIPF3Q9GZM5 350 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 EVPLLA8MZ36 301 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 SLC35G2Q8TBE7 412 aa16.12■□□□□ 0.17
PTPN21-201ENST00000328736 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 KDSRQ06136 332 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 RABGAP1LQ5R372 815 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 MS4A14Q96JA4 679 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 MAN1C1Q9NR34 630 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 RRN3P2A6NIE6 340 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 PNPLA4P41247 253 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 NPEPPSP55786 919 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ZRANB3Q5FWF4 1079 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ATF7IP2Q5U623 682 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 TRAPPC11Q7Z392 1133 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 SLC25A41Q8N5S1 370 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 NMRK1Q9NWW6 199 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 PDGFRBP09619 1106 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 MZF1P28698 734 aaPredicted RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 OR1G1P47890 313 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ACOT2P49753 483 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 SREBF2Q12772 1141 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 STRIP1Q5VSL9 837 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms