RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 NR2E1Q9Y466 385 aa16.93■□□□□ 0.3
SYNM-201ENST00000328642 HMGB1P1B2RPK0 211 aaPredicted RBP16.92■□□□□ 0.3
SYNM-201ENST00000328642 SLC26A4O43511 780 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 APRTP07741 180 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 LAMC2Q13753 1193 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 FAM117BQ6P1L5 589 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 PRMT7Q9NVM4 692 aaPredicted RBP16.92■□□□□ 0.3
SYNM-201ENST00000328642 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
SYNM-201ENST00000328642 GTPBP10A4D1E9 387 aaKnown RBP16.92■□□□□ 0.3
SYNM-201ENST00000328642 F8VP50 259 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 COILP38432 576 aaPredicted RBP16.92■□□□□ 0.3
SYNM-201ENST00000328642 EIF3EP60228 445 aaKnown RBP16.92■□□□□ 0.3
SYNM-201ENST00000328642 RBP5P82980 135 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 LMNB2Q03252 620 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 GEN1Q17RS7 908 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 FOXR1Q6PIV2 292 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 TTC17Q96AE7 1141 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 TMEM121Q9BTD3 319 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 P4HA2O15460 535 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 CPP00450 1065 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 CST3P01034 146 aaPredicted RBP16.92■□□□□ 0.3
SYNM-201ENST00000328642 ABCD1P33897 745 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 KCNV1Q6PIU1 500 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 MPZL3Q6UWV2 235 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 ATL2Q8NHH9 583 aa16.92■□□□□ 0.3
SYNM-201ENST00000328642 EPS8L3Q8TE67 593 aaKnown RBP16.92■□□□□ 0.3
SYNM-201ENST00000328642 EDIL3O43854 480 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 ALDH3A1P30838 453 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 IRAK1P51617 712 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 MAPK7Q13164 816 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 DGKDQ16760 1214 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 CFAP157Q5JU67 520 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 DNERQ8NFT8 737 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 LRRC8CQ8TDW0 803 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 CHST7Q9NS84 486 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 ASNSD1Q9NWL6 643 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 ZSCAN5DPP0CG00 497 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 RARAP10276 462 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 RBP3P10745 1247 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 KCNA2P16389 499 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 PHBP35232 272 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 RPL7AP62424 266 aaKnown RBP16.91■□□□□ 0.3
SYNM-201ENST00000328642 CENPUQ71F23 418 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 FAM71DQ8N9W8 422 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 TBC1D31Q96DN5 1066 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 SLC13A1Q9BZW2 595 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 ISCUQ9H1K1 167 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 XPNPEP1Q9NQW7 623 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 PIH1D1Q9NWS0 290 aaKnown RBP16.91■□□□□ 0.3
SYNM-201ENST00000328642 SESN2P58004 480 aaPredicted RBP16.91■□□□□ 0.3
SYNM-201ENST00000328642 PPP2R2AP63151 447 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 ZNF449Q6P9G9 518 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 HNRNPLLQ8WVV9 542 aaKnown RBP16.91■□□□□ 0.3
SYNM-201ENST00000328642 RNPEPQ9H4A4 650 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 DPP3Q9NY33 737 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 DCTN4Q9UJW0 460 aa16.91■□□□□ 0.3
SYNM-201ENST00000328642 LACTBL1A8MY62 500 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 SRGAP2BP0DMP2 458 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 MAPTP10636 758 aaKnown RBP16.9■□□□□ 0.3
SYNM-201ENST00000328642 SPATA18Q8TC71 538 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 RAB6BQ9NRW1 208 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 MAP3K20Q9NYL2 800 aaKnown RBP16.9■□□□□ 0.3
SYNM-201ENST00000328642 KLHL14Q9P2G3 628 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 PCDHA2Q9Y5H9 948 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 SPATA31C2B4DYI2 1134 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 MYO1CO00159 1063 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 KCNN4O15554 427 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 ADSSP30520 456 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 AP1B1Q10567 949 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 BYSLQ13895 437 aaKnown RBP16.9■□□□□ 0.3
SYNM-201ENST00000328642 DCAF6Q58WW2 860 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 NIPA1Q7RTP0 329 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 MCOLN2Q8IZK6 566 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 PARK7Q99497 189 aaKnown RBP16.9■□□□□ 0.3
SYNM-201ENST00000328642 CGRRF1Q99675 332 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 NT5C1AQ9BXI3 368 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 CEP41Q9BYV8 373 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.9■□□□□ 0.3
SYNM-201ENST00000328642 AHDC1Q5TGY3 1603 aaPredicted RBP16.9■□□□□ 0.3
SYNM-201ENST00000328642 MT-ND3P03897 115 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 MUTP22033 750 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 GOLGA7BQ2TAP0 167 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 C6orf118Q5T5N4 469 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 ANKRD20A3Q5VUR7 823 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 TMC2Q8TDI7 906 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 STRIP2Q9ULQ0 834 aa16.9■□□□□ 0.3
SYNM-201ENST00000328642 PRG3Q9Y2Y8 225 aaPredicted RBP16.9■□□□□ 0.3
SYNM-201ENST00000328642 PJA2O43164 708 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 UPP2O95045 317 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 NFICP08651 508 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 E2F5Q15329 346 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 TRIM72Q6ZMU5 477 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 SNF8Q96H20 258 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 KCND1Q9NSA2 647 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 CHMP2BQ9UQN3 213 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 PCDHGC5Q9Y5F6 944 aa16.89■□□□□ 0.3
SYNM-201ENST00000328642 TCRBV7S2A1N4TA0A589 114 aa16.89■□□□□ 0.29
SYNM-201ENST00000328642 FAM187AA6NFU0 413 aa16.89■□□□□ 0.29
SYNM-201ENST00000328642 MAGEB2O15479 319 aa16.89■□□□□ 0.29
SYNM-201ENST00000328642 DHX15O43143 795 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms