RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 FAM25CB3EWG5 89 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 FAM25GB3EWG6 89 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 F8VZ95 297 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 SNRPAP09012 282 aaKnown RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 SRGNP10124 158 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 C21orf59P57076 290 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 MTMR1Q13613 665 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 KCNB1Q14721 858 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 APLFQ8IW19 511 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 SNX31Q8N9S9 440 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 TRIM43BA6NCK2 446 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 GEMIN4P57678 1058 aaKnown RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 ARMC4Q5T2S8 1044 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 C12orf60Q5U649 245 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 RNF219Q5W0B1 726 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 C18orf8Q96DM3 657 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 MXD3Q9BW11 206 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 ROPN1BQ9BZX4 212 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 ROPN1Q9HAT0 212 aaPredicted RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 USP17L10C9JJH3 530 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 TRIM13O60858 407 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 TP53BP2Q13625 1128 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 LRRN4CLQ8ND94 238 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 ARHGEF26Q96DR7 871 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 THUMPD3Q9BV44 507 aaKnown RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 HNRNPRO43390 633 aaKnown RBP17.18■□□□□ 0.34
SMAD3-201ENST00000327367 FAXCQ5TGI0 409 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 CATSPER4Q7RTX7 472 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 GDPD5Q8WTR4 605 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 STK39Q9UEW8 545 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 SLC39A10Q9ULF5 831 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 PEG3Q9GZU2 1588 aa17.18■□□□□ 0.34
SMAD3-201ENST00000327367 TRIM49D1C9J1S8 452 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 ZNF862O60290 1169 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 TBC1D12O60347 775 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 IL12RB1P42701 662 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 NFX1Q12986 1120 aaKnown RBP17.17■□□□□ 0.34
SMAD3-201ENST00000327367 TNFAIP1Q13829 316 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 ERFEQ4G0M1 354 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.17■□□□□ 0.34
SMAD3-201ENST00000327367 DCLRE1BQ9H816 532 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 BCL10O95999 233 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 MMGT1Q8N4V1 131 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 CCDC33Q8N5R6 958 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 FAM71DQ8N9W8 422 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 MAGEB18Q96M61 343 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 CHKBQ9Y259 395 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 TBXAS1P24557 533 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-201ENST00000327367 GSSP48637 474 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 COX10Q12887 443 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 OTOAQ7RTW8 1153 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 ZNF467Q7Z7K2 595 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-201ENST00000327367 SH2D3AQ9BRG2 576 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 TRIM54Q9BYV2 358 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 GPBP1L1Q9HC44 474 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-201ENST00000327367 DUSP10Q9Y6W6 482 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 POU1F1P28069 291 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 KCNQ4P56696 695 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 DDI2Q5TDH0 399 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 BBS7Q8IWZ6 715 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 SHCBP1Q8NEM2 672 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 CENPTQ96BT3 561 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 CFAP99D6REC4 459 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 MYCP01106 439 aaPredicted RBP17.17■□□□□ 0.34
SMAD3-201ENST00000327367 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 C11orf88Q6PI97 169 aa17.17■□□□□ 0.34
SMAD3-201ENST00000327367 E9PBE3 544 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 KLHL41O60662 606 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 HUS1O60921 280 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 PTPN7P35236 360 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 FLT3P36888 993 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 ITGADQ13349 1161 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 AASDHQ4L235 1098 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 EPC2Q52LR7 807 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 LLGL2Q6P1M3 1020 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 C11orf96Q7Z7L8 435 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 APOL5Q9BWW9 433 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 PKP3Q9Y446 797 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 AHCYL1O43865 530 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 ABCD1P33897 745 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 CCT3P49368 545 aaKnown RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 ZSWIM7Q19AV6 140 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 RDM1Q8NG50 284 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 SPIRE2Q8WWL2 714 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 POLR3FQ9H1D9 316 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 ADD3Q9UEY8 706 aaKnown RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 CLCA2Q9UQC9 943 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 PTPRTO14522 1441 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 COILP38432 576 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 SLC1A1P43005 524 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 NAB2Q15742 525 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 ELMSAN1Q6PJG2 1045 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 MCRS1Q96EZ8 462 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 FAM58BPP0C7Q3 252 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 DGKKQ5KSL6 1271 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 SAPCD2Q86UD0 394 aa17.16■□□□□ 0.34
SMAD3-201ENST00000327367 COL23A1Q86Y22 540 aaPredicted RBP17.16■□□□□ 0.34
SMAD3-201ENST00000327367 AHI1Q8N157 1196 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms