RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 HAUS4Q9H6D7 363 aa10.96□□□□□ -0.66
VIPAS39-201ENST00000327028 PYCARDQ9ULZ3 195 aa10.96□□□□□ -0.66
VIPAS39-201ENST00000327028 TSC2P49815 1807 aa10.96□□□□□ -0.66
VIPAS39-201ENST00000327028 TBKBP1A7MCY6 615 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 TMEM189-UBE2V1I3L0A0 370 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 DGKIO75912 1065 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 FGBP02675 491 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 CLCN1P35523 988 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 EIF4A3P38919 411 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 BPIFB4P59827 614 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 DEFB103AP81534 67 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 DCLRE1AQ6PJP8 1040 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 TOP6BLQ8N6T0 577 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 C3orf58Q8NDZ4 430 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 EPS8L1Q8TE68 723 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 FAM193BQ96PV7 902 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 PAAF1Q9BRP4 392 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 SYT11Q9BT88 431 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 CILPO75339 1184 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 TACC1O75410 805 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 UPP2O95045 317 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 SYN1P17600 705 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 CYLC1P35663 651 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 PDE6CP51160 858 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 CDH8P55286 799 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 PTK2Q05397 1052 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 MTF1Q14872 753 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 ASTE1Q2TB18 679 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 ZNF365Q70YC5 407 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 ZNF571Q7Z3V5 609 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 CCDC42Q96M95 316 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 TMEM175Q9BSA9 504 aa10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 RC3H2Q9HBD1 1191 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 NOCTQ9UK39 431 aaKnown RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 ZMYND8Q9ULU4 1186 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 BARX2Q9UMQ3 279 aaPredicted RBP10.95□□□□□ -0.66
VIPAS39-201ENST00000327028 HUS1O60921 280 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 KIF4AO95239 1232 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 FAM163BP0C2L3 166 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 KIF11P52732 1056 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 EPHB4P54760 987 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 SOWAHAQ2M3V2 549 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 TMEM240Q5SV17 173 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 CD300LGQ6UXG3 332 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 DPH6Q7L8W6 267 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 OTOP2Q7RTS6 562 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 SLC47A2Q86VL8 602 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 APPL2Q8NEU8 664 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 OLIG1Q8TAK6 271 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 DEF6Q9H4E7 631 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 NRDE2Q9H7Z3 1164 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 DNAJB4Q9UDY4 337 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 L1RE1Q9UN81 338 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 CYB561D2O14569 222 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 B3GAT3O94766 335 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 NDUFA10O95299 355 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 CYP11B1P15538 503 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 TOGARAM2Q6ZUX3 1019 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 NOP9Q86U38 636 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 VPS36Q86VN1 386 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 ZSCAN30Q86W11 494 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 WHAMMQ8TF30 809 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 RABGGTAQ92696 567 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 DPF3Q92784 378 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 ZNF689Q96CS4 500 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 SENP8Q96LD8 212 aa10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 MRPL45Q9BRJ2 306 aaKnown RBP10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 EPN1Q9Y6I3 576 aaPredicted RBP10.94□□□□□ -0.66
VIPAS39-201ENST00000327028 ZBBXA8MT70 800 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 EIF3CLB5ME19 914 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 PAEPP09466 180 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 ODC1P11926 461 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 WARSP23381 471 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 IGFBP6P24592 240 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 GNA15P30679 374 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 OR1G1P47890 313 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 PAN2Q504Q3 1202 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 DSTYKQ6XUX3 929 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 ZNF677Q86XU0 584 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 CMTR2Q8IYT2 770 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 ADGRF2Q8IZF7 708 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 PDCL2Q8N4E4 241 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 SPATA18Q8TC71 538 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 SLC20A1Q8WUM9 679 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 HERVK_113Q902F9 699 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 EIF3CQ99613 913 aaKnown RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 AGPAT1Q99943 283 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 LBHD1Q9BQE6 289 aaPredicted RBP10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 HMGXB4Q9UGU5 601 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 M0QZQ0 153 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 AKR1B10O60218 316 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 LCA5LO95447 670 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 SLC11A1P49279 550 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 NDST1P52848 882 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 RAD23BP54727 409 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 CDR2Q01850 454 aa10.93□□□□□ -0.66
VIPAS39-201ENST00000327028 BMS1Q14692 1282 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms