RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	SNF8	Q96H20	258 aa		12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	KCNN4	O15554	427 aa		12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	ZNF862	O60290	1169 aa		12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	ONECUT3	O60422	494 aa	Predicted RBP	12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	COIL	P38432	576 aa	Predicted RBP	12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	ARL4C	P56559	192 aa		12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	TSEN2	Q8NCE0	465 aa	Known RBP	12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	NT5C1A	Q9BXI3	368 aa		12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	LRFN2	Q9ULH4	789 aa		12.48	□□□□□ -0.41
DDR1-223	ENST00000324771	SSX2IP	Q9Y2D8	614 aa		12.48	□□□□□ -0.41
DDR1-223	ENST00000324771		A0A0G2JND7	137 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	MAGEB2	O15479	319 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	PIAS1	O75925	651 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	GCLC	P48506	637 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	IRAK1	P51617	712 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	BYSL	Q13895	437 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	DHX34	Q14147	1143 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	FAM182A	Q5T1J6	154 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	CCDC62	Q6P9F0	684 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	SPATA18	Q8TC71	538 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	EPS8L1	Q8TE68	723 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	LENG9	Q96B70	501 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	ISCU	Q9H1K1	167 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	GBA2	Q9HCG7	927 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	SAE1	Q9UBE0	346 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	CCDC195	A0A1B0GUA6	201 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	KIT	P10721	976 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	BEX3	Q00994	111 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	DGKD	Q16760	1214 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	DCAF6	Q58WW2	860 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	ZBTB41	Q5SVQ8	909 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	PDZD4	Q76G19	769 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	FAM71D	Q8N9W8	422 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	SEMA4D	Q92854	862 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	PITPNM3	Q9BZ71	974 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	GMNC	A6NCL1	334 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	MAPK7	Q13164	816 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	NT5DC3	Q86UY8	548 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	MAP4K3	Q8IVH8	894 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	USP33	Q8TEY7	942 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	KLHL29	Q96CT2	875 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	PARK7	Q99497	189 aa	Known RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	SEMA4A	Q9H3S1	761 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	RRAGC	Q9HB90	399 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	SNTG2	Q9NY99	539 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	CHMP2B	Q9UQN3	213 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	TAF1	P21675	1872 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	ADCY3	O60266	1144 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	PPP1R37	O75864	691 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	UPP2	O95045	317 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	EEF1DP3	Q658K8	133 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	WDR93	Q6P2C0	686 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	MPZL3	Q6UWV2	235 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	EPM2AIP1	Q7L775	607 aa	Predicted RBP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	PID1	Q7Z2X4	250 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	LRRN4	Q8WUT4	740 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	TMEM121	Q9BTD3	319 aa		12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
DDR1-223	ENST00000324771	GTPBP10	A4D1E9	387 aa	Known RBP	12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	ARHGAP42	A6NI28	874 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	TBC1D12	O60347	775 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	MYBL1	P10243	752 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	GNAT1	P11488	350 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	ACAT1	P24752	427 aa	Known RBP	12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	GOLGA7B	Q2TAP0	167 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	NLRP14	Q86W24	1093 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	CCDC117	Q8IWD4	279 aa	Predicted RBP	12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	EPS8L3	Q8TE67	593 aa	Known RBP	12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	DNAJB3	Q8WWF6	145 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	PPP1R12C	Q9BZL4	782 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	DPP3	Q9NY33	737 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	NEU2	Q9Y3R4	380 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	ZNF142	P52746	1687 aa	Predicted RBP	12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	ATP9B	O43861	1147 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	STAMBP	O95630	424 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	DRP2	Q13474	957 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	KCTD17	Q8N5Z5	321 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	CLEC4D	Q8WXI8	215 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	STMN2	Q93045	179 aa		12.46	□□□□□ -0.41
DDR1-223	ENST00000324771	ABCC6	O95255	1503 aa		12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	RPS6KA5	O75582	802 aa		12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	NPM3	O75607	178 aa	Known RBP	12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	HMBS	P08397	361 aa		12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	HGSNAT	Q68CP4	663 aa		12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	RYBP	Q8N488	228 aa	Predicted RBP	12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	REPS2	Q8NFH8	660 aa		12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	AGR3	Q8TD06	166 aa		12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	MAML1	Q92585	1016 aa		12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	CDKL2	Q92772	493 aa		12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	PRMT1	Q99873	361 aa	Known RBP	12.46	□□□□□ -0.42
DDR1-223	ENST00000324771	CHN1	P15882	459 aa		12.45	□□□□□ -0.42
DDR1-223	ENST00000324771	MUT	P22033	750 aa		12.45	□□□□□ -0.42
DDR1-223	ENST00000324771	ROR1	Q01973	937 aa		12.45	□□□□□ -0.42
DDR1-223	ENST00000324771	NAA25	Q14CX7	972 aa		12.45	□□□□□ -0.42
DDR1-223	ENST00000324771	HEATR6	Q6AI08	1181 aa	Known RBP	12.45	□□□□□ -0.42
DDR1-223	ENST00000324771	EP400NL	Q6ZTU2	488 aa		12.45	□□□□□ -0.42

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