RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 APBB2Q92870 758 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 PGBD4Q96DM1 585 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
DDX39A-202ENST00000324340 CCDC42Q96M95 316 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 PPP1R10Q96QC0 940 aaKnown RBP13.65□□□□□ -0.22
DDX39A-202ENST00000324340 CARD6Q9BX69 1037 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 NIF3L1Q9GZT8 377 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-202ENST00000324340 HIPK3Q9H422 1215 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 UBN1Q9NPG3 1134 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 KLK14Q9P0G3 267 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 PPP2R2CQ9Y2T4 447 aa13.65□□□□□ -0.22
DDX39A-202ENST00000324340 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 TRIM66O15016 1216 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 EOMESO95936 686 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 KRT19P08727 400 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 CCDC175P0C221 793 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 LRPAP1P30533 357 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 POLR2BP30876 1174 aaKnown RBP13.64□□□□□ -0.23
DDX39A-202ENST00000324340 ASPAP45381 313 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 ARID5AQ03989 594 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 TDRD12Q587J7 1177 aaKnown RBP13.64□□□□□ -0.23
DDX39A-202ENST00000324340 GLRA4Q5JXX5 417 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 SLC24A5Q71RS6 500 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 NECAB2Q7Z6G3 386 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 C18orf25Q96B23 403 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-202ENST00000324340 ELMO3Q96BJ8 720 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 BCO2Q9BYV7 579 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 MCOLN1Q9GZU1 580 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 WNT8AQ9H1J5 351 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 FAM124BQ9H5Z6 455 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-202ENST00000324340 VIPAS39Q9H9C1 493 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■■■ 32
DDX39A-202ENST00000324340 SLC38A7Q9NVC3 462 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-202ENST00000324340 TUBGCP4Q9UGJ1 667 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
DDX39A-202ENST00000324340 REXO2Q9Y3B8 237 aaKnown RBP13.64□□□□□ -0.23
DDX39A-202ENST00000324340 ARL5CA6NH57 179 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 PIRO00625 290 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 ZNF263O14978 683 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 CLTBP09497 229 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 GUCY2FP51841 1108 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 KRT83P78385 493 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 NAB2Q15742 525 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 SLC18A3Q16572 532 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 LRRC26Q2I0M4 334 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 ZNF667Q5HYK9 610 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 C9orf57Q5W0N0 161 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 ZNF662Q6ZS27 426 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 ZNF571Q7Z3V5 609 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-202ENST00000324340 UBE2Q1Q7Z7E8 422 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 TMEM130Q8N3G9 435 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 SEPT8Q92599 483 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 LPPQ93052 612 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 HPDLQ96IR7 371 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 ZFP42Q96MM3 310 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 DESI2Q9BSY9 194 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 PARD6BQ9BYG5 372 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 ELAC1Q9H777 363 aaKnown RBP13.63□□□□□ -0.23
DDX39A-202ENST00000324340 RSAD1Q9HA92 442 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 LCMT1Q9UIC8 334 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 NENFQ9UMX5 172 aa13.63□□□□□ -0.23
DDX39A-202ENST00000324340 AKR1B10O60218 316 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 MLH1P40692 756 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 SOX4Q06945 474 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-202ENST00000324340 MYO1EQ12965 1108 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 WDR72Q3MJ13 1102 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 LRRN4CLQ8ND94 238 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 ACRBPQ8NEB7 543 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 DBF4BQ8NFT6 615 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 SLC30A5Q8TAD4 765 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 EPS8L1Q8TE68 723 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 SECISBP2LQ93073 1101 aaKnown RBP13.62□□□□□ -0.23
DDX39A-202ENST00000324340 GAD1Q99259 594 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 CYP3A43Q9HB55 503 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 DONSONQ9NYP3 566 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 NOCTQ9UK39 431 aaKnown RBP13.62□□□□□ -0.23
DDX39A-202ENST00000324340 ATP11BQ9Y2G3 1177 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 ATP8B3O60423 1300 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 SCN5AQ14524 2016 aa13.62□□□□□ -0.23
DDX39A-202ENST00000324340 A0A087X0T9 212 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 A6NNZ2 444 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 ENPP3O14638 875 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 CYP26A1O43174 497 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 THP07101 528 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 FAM228BP0C875 321 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 P4HA1P13674 534 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 CYP11B1P15538 503 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 MCM3P25205 808 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 RFC2P35250 354 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 PNPLA4P41247 253 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 ZNF132P52740 706 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 BPIFB4P59827 614 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 YWHAEP62258 255 aaKnown RBP13.61□□□□□ -0.23
DDX39A-202ENST00000324340 GFPT1Q06210 699 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-202ENST00000324340 SPA17Q15506 151 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
DDX39A-202ENST00000324340 DNAJC21Q5F1R6 531 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms