RNA–Protein interactions for RNA: ENST00000323374.8

SPHK1-201, Transcript of sphingosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene SPHK1, Length 2,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-201ENST00000323374 C1orf54Q8WWF1 131 aa23.1■■□□□ 1.29
SPHK1-201ENST00000323374 EMID1Q96A84 441 aaPredicted RBP23.1■■□□□ 1.29
SPHK1-201ENST00000323374 BTBD19C9JJ37 291 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 GNGT1P63211 74 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 TNFAIP2Q03169 654 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 SCARA5Q6ZMJ2 495 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 AFG1LQ8WV93 481 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 CENPHQ9H3R5 247 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.09■■□□□ 1.29
SPHK1-201ENST00000323374 IP6K2Q9UHH9 426 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 AKT3Q9Y243 479 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 TMOD1P28289 359 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 GTF2A2P52657 109 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 PPP1R7Q15435 360 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 ZNF467Q7Z7K2 595 aaPredicted RBP23.09■■□□□ 1.29
SPHK1-201ENST00000323374 IFNLR1Q8IU57 520 aaPredicted RBP23.09■■□□□ 1.29
SPHK1-201ENST00000323374 LINC01465Q8N7H1 131 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 MS4A4AQ96JQ5 239 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 FAM129AQ9BZQ8 928 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 PCDHGC3Q9UN70 934 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 CLEC11AQ9Y240 323 aa23.09■■□□□ 1.29
SPHK1-201ENST00000323374 COL1A2P08123 1366 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 A0A087WZ62 844 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 CCL15-CCL14A0A0B4J2E2 113 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 GPR25O00155 361 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 KRT19P08727 400 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 MCF2P10911 925 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 GCLCP48506 637 aaPredicted RBP23.08■■□□□ 1.29
SPHK1-201ENST00000323374 PMS2P54278 862 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 EIF3BP55884 814 aaKnown RBP23.08■■□□□ 1.29
SPHK1-201ENST00000323374 CCL15Q16663 113 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 DAB2IPQ5VWQ8 1189 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 CCDC50Q8IVM0 306 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 TMEM192Q8IY95 271 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 KATNAL2Q8IYT4 538 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 FDXACB1Q9BRP7 624 aaPredicted RBP23.08■■□□□ 1.29
SPHK1-201ENST00000323374 LCMT1Q9UIC8 334 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 USTQ9Y2C2 406 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 CEP83Q9Y592 693 aa23.08■■□□□ 1.29
SPHK1-201ENST00000323374 EIF4BP23588 611 aaKnown RBP23.08■■□□□ 1.28
SPHK1-201ENST00000323374 ADCYAP1R1P41586 468 aa23.08■■□□□ 1.28
SPHK1-201ENST00000323374 ATP1A2P50993 1020 aa23.08■■□□□ 1.28
SPHK1-201ENST00000323374 TAS2R40P59535 323 aa23.08■■□□□ 1.28
SPHK1-201ENST00000323374 PABPC3Q9H361 631 aaKnown RBP23.08■■□□□ 1.28
SPHK1-201ENST00000323374 NXF1Q9UBU9 619 aaKnown RBP23.08■■□□□ 1.28
SPHK1-201ENST00000323374 EIF3HO15372 352 aaKnown RBP eCLIP23.07■■□□□ 1.283e-7■■■□□ 17.2
SPHK1-201ENST00000323374 STAG3L1P0CL83 205 aa23.07■■□□□ 1.28
SPHK1-201ENST00000323374 SSR1P43307 286 aaKnown RBP23.07■■□□□ 1.28
SPHK1-201ENST00000323374 IFFO1Q0D2I5 559 aa23.07■■□□□ 1.28
SPHK1-201ENST00000323374 AMHR2Q16671 573 aa23.07■■□□□ 1.28
SPHK1-201ENST00000323374 ART4Q93070 314 aa23.07■■□□□ 1.28
SPHK1-201ENST00000323374 HOMER3Q9NSC5 361 aa23.07■■□□□ 1.28
SPHK1-201ENST00000323374 MORF4L1Q9UBU8 362 aa23.07■■□□□ 1.28
SPHK1-201ENST00000323374 FEZ2Q9UHY8 353 aaPredicted RBP23.07■■□□□ 1.28
SPHK1-201ENST00000323374 TMEM191CA6NGB0 347 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 PPFIA4O75335 1185 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 CSDE1O75534 798 aaKnown RBP23.06■■□□□ 1.28
SPHK1-201ENST00000323374 GJB6O95452 261 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 ZNF286BP0CG31 522 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 CDH5P33151 784 aaPredicted RBP23.06■■□□□ 1.28
SPHK1-201ENST00000323374 LACTBP83111 547 aaPredicted RBP23.06■■□□□ 1.28
SPHK1-201ENST00000323374 SNX1Q13596 522 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 ZNF667Q5HYK9 610 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 AGBL2Q5U5Z8 902 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 DNAJC24Q6P3W2 148 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 SYDE1Q6ZW31 735 aaPredicted RBP23.06■■□□□ 1.28
SPHK1-201ENST00000323374 EXD1Q8NHP7 514 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 GRK7Q8WTQ7 553 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 FAXDC2Q96IV6 333 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 C16orf70Q9BSU1 422 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 KATNBL1Q9H079 304 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 CHST7Q9NS84 486 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 GRIN2DO15399 1336 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 SCN4AP35499 1836 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 LACTBL1A8MY62 500 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 O00370 1275 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 ZEB2O60315 1214 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 NFICP08651 508 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 RALAP11233 206 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 RPL7AP62424 266 aaKnown RBP23.06■■□□□ 1.28
SPHK1-201ENST00000323374 KRT17Q04695 432 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 MKRN3Q13064 507 aaKnown RBP23.06■■□□□ 1.28
SPHK1-201ENST00000323374 CALCOCO2Q13137 446 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 ANKRD23Q86SG2 305 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 ARFGAP2Q8N6H7 521 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 TFAP2BQ92481 460 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 PPP1R16BQ96T49 567 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 HERPUD2Q9BSE4 406 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 DCLK3Q9C098 648 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 PDZD7Q9H5P4 517 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 SIX4Q9UIU6 781 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 POLIQ9UNA4 740 aa23.06■■□□□ 1.28
SPHK1-201ENST00000323374 SNAI1O95863 264 aaPredicted RBP23.05■■□□□ 1.28
SPHK1-201ENST00000323374 NUDT17P0C025 328 aa23.05■■□□□ 1.28
SPHK1-201ENST00000323374 MTHFD1LQ6UB35 978 aa23.05■■□□□ 1.28
SPHK1-201ENST00000323374 DPP9Q86TI2 863 aa23.05■■□□□ 1.28
SPHK1-201ENST00000323374 ERICH1Q86X53 443 aa23.05■■□□□ 1.28
SPHK1-201ENST00000323374 C1orf127Q8N9H9 656 aa23.05■■□□□ 1.28
SPHK1-201ENST00000323374 BRI3BPQ8WY22 251 aa23.05■■□□□ 1.28
SPHK1-201ENST00000323374 EVPLQ92817 2033 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms