RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 MGAT3Q09327 533 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 INCA1Q0VD86 236 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 TSEN34Q9BSV6 310 aaKnown RBP19.01■□□□□ 0.63
RAB39A-201ENST00000320578 SENP6Q9GZR1 1112 aaPredicted RBP19.01■□□□□ 0.63
RAB39A-201ENST00000320578 CARD9Q9H257 536 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 LCMT1Q9UIC8 334 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 KIAA1257Q9ULG3 409 aa19.01■□□□□ 0.63
RAB39A-201ENST00000320578 PACSIN2Q9UNF0 486 aaPredicted RBP19.01■□□□□ 0.63
RAB39A-201ENST00000320578 NOC2LQ9Y3T9 749 aaKnown RBP19.01■□□□□ 0.63
RAB39A-201ENST00000320578 DDX3YO15523 660 aaKnown RBP19■□□□□ 0.63
RAB39A-201ENST00000320578 MCM3P25205 808 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 RBM10P98175 930 aaKnown RBP19■□□□□ 0.63
RAB39A-201ENST00000320578 CCDC70Q6NSX1 233 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 WDR93Q6P2C0 686 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 TMEM35BQ8NCS4 154 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 RAET1EQ8TD07 263 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 WNT8AQ9H1J5 351 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 NXF3Q9H4D5 531 aaKnown RBP19■□□□□ 0.63
RAB39A-201ENST00000320578 CCDC151A5D8V7 595 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 CALCAP01258 141 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 MMP8P22894 467 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 PTP4A2Q12974 167 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 GLE1Q53GS7 698 aaKnown RBP19■□□□□ 0.63
RAB39A-201ENST00000320578 CPA5Q8WXQ8 436 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 ZMAT2Q96NC0 199 aaKnown RBP19■□□□□ 0.63
RAB39A-201ENST00000320578 PSMB7Q99436 277 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 SDCBP2Q9H190 292 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 GOLPH3Q9H4A6 298 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 MRPL47Q9HD33 250 aaKnown RBP19■□□□□ 0.63
RAB39A-201ENST00000320578 SAGE1Q9NXZ1 904 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 ADAM22Q9P0K1 906 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 TMEM59LQ9UK28 342 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 BARX2Q9UMQ3 279 aaPredicted RBP19■□□□□ 0.63
RAB39A-201ENST00000320578 SCINQ9Y6U3 715 aa19■□□□□ 0.63
RAB39A-201ENST00000320578 TRIP12Q14669 1992 aaPredicted RBP18.99■□□□□ 0.63
RAB39A-201ENST00000320578 GRIN2DO15399 1336 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 CITO14578 2027 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 MOXD2PA6NHM9 499 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 CAND2O75155 1236 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 CALB1P05937 261 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 ATF7P17544 494 aaPredicted RBP18.99■□□□□ 0.63
RAB39A-201ENST00000320578 SLC1A1P43005 524 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 RAD23BP54727 409 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 TNNC1P63316 161 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 PTK7Q13308 1070 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 PLEKHA7Q6IQ23 1121 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 SCARA5Q6ZMJ2 495 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 USP38Q8NB14 1042 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 SLAIN1Q8ND83 568 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 WHAMMQ8TF30 809 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 HNRNPLLQ8WVV9 542 aaKnown RBP18.99■□□□□ 0.63
RAB39A-201ENST00000320578 IPPQ9Y573 584 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 CEP83Q9Y592 693 aa18.99■□□□□ 0.63
RAB39A-201ENST00000320578 GPR182O15218 404 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 RPS6KA5O75582 802 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 CTNNA2P26232 953 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 VEGFBP49765 207 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 FAM47CQ5HY64 1035 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 FAM26DQ5JW98 314 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 UBL4BQ8N7F7 174 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 SMG8Q8ND04 991 aaKnown RBP18.98■□□□□ 0.63
RAB39A-201ENST00000320578 CD101Q93033 1021 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 TMEM176AQ96HP8 235 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 ZSWIM1Q9BR11 485 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.98■□□□□ 0.63
RAB39A-201ENST00000320578 TRAIPQ9BWF2 469 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 SMYD3Q9H7B4 428 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 SQORQ9Y6N5 450 aa18.98■□□□□ 0.63
RAB39A-201ENST00000320578 SMIM28A0A1B0GU29 152 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 PGRMC1O00264 195 aaKnown RBP18.97■□□□□ 0.63
RAB39A-201ENST00000320578 TLR3O15455 904 aaKnown RBP18.97■□□□□ 0.63
RAB39A-201ENST00000320578 FKTNO75072 461 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 CHRNA1P02708 482 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 CFHP08603 1231 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 VDRP11473 427 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 RRM1P23921 792 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 BRD2P25440 801 aaKnown RBP18.97■□□□□ 0.63
RAB39A-201ENST00000320578 PNPLA4P41247 253 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 CLCN6P51797 869 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 HACE1Q8IYU2 909 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 SLC4A11Q8NBS3 891 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 TFAP2BQ92481 460 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 MS4A14Q96JA4 679 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 HES2Q9Y543 173 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 THSD7BQ9C0I4 1608 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 CCDC66A2RUB6 948 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 PIRO00625 290 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 COMTP21964 271 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 GUCY2FP51841 1108 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 STILQ15468 1287 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 PTGISQ16647 500 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 C9orf57Q5W0N0 161 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 NAP1L3Q99457 506 aaPredicted RBP18.97■□□□□ 0.63
RAB39A-201ENST00000320578 EPC1Q9H2F5 836 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 PARVAQ9NVD7 372 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 ST3GAL5Q9UNP4 418 aa18.97■□□□□ 0.63
RAB39A-201ENST00000320578 ATMINO43313 823 aaPredicted RBP18.96■□□□□ 0.63
RAB39A-201ENST00000320578 ATP8B1O43520 1251 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 CEP104O60308 925 aa18.96■□□□□ 0.63
RAB39A-201ENST00000320578 FAM163BP0C2L3 166 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms