RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 R3HDM2Q9Y2K5 976 aaKnown RBP4.73□□□□□ -1.65
CNOT1-201ENST00000317147 SALL3Q9BXA9 1300 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 GOLGA8RI6L899 631 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 C2CD2LO14523 706 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 ADD2P35612 726 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 ST13P50502 369 aaKnown RBP4.73□□□□□ -1.65
CNOT1-201ENST00000317147 KCNQ4P56696 695 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 RUNX1T1Q06455 604 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.73□□□□□ -1.65
CNOT1-201ENST00000317147 CDR2LQ86X02 465 aaPredicted RBP4.73□□□□□ -1.65
CNOT1-201ENST00000317147 NUDCD3Q8IVD9 361 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 MIGA1Q8NAN2 632 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 ARHGEF10LQ9HCE6 1279 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 PHF11Q9UIL8 331 aa4.73□□□□□ -1.65
CNOT1-201ENST00000317147 FBXO2Q9UK22 296 aaPredicted RBP4.73□□□□□ -1.65
CNOT1-201ENST00000317147 PTBP2Q9UKA9 531 aaKnown RBP4.73□□□□□ -1.65
CNOT1-201ENST00000317147 MEIS1O00470 390 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ZNF185O15231 689 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TLR3O15455 904 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TEX33O43247 280 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 LDHAP00338 332 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 IFNB1P01574 187 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 MXI1P50539 228 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 AMPD2Q01433 879 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TRIP10Q15642 601 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 KLHL12Q53G59 568 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SHC4Q6S5L8 630 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 MOXD1Q6UVY6 613 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TRIM59Q8IWR1 403 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 FAM133AQ8N9E0 248 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ACCSQ96QU6 501 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SH3GL1Q99961 368 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PRDM11Q9NQV5 511 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 UBAP1Q9NZ09 502 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 VTI1BQ9UEU0 232 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 DCDC2Q9UHG0 476 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 FAM153AQ9UHL3 310 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PADI4Q9UM07 663 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TBX22Q9Y458 520 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 NWD2Q9ULI1 1742 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 CELSR3Q9NYQ7 3312 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 COL6A6A6NMZ7 2263 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ARHGEF37A1IGU5 675 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SNTNA6NMZ2 147 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 GUCY1B2O75343 617 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 THRAP10827 490 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 GTF2H1P32780 548 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 HP1BP3Q5SSJ5 553 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 MYLK4Q86YV6 388 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 MYCT1Q8N699 235 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SETD9Q8NE22 299 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 LRRC39Q96DD0 335 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 MTERF3Q96E29 417 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 RBM15Q96T37 977 aaKnown RBP eCLIP4.72□□□□□ -1.651e-6■■□□□ 14.5
CNOT1-201ENST00000317147 MAGEB5Q9BZ81 275 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 VAT1LQ9HCJ6 419 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ADAMTS1Q9UHI8 967 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ZNF229Q9UJW7 825 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 GTF3C4Q9UKN8 822 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 DTNAQ9Y4J8 743 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SGK1O00141 431 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 HSPA4LO95757 839 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TNNC2P02585 160 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 HOXB8P17481 243 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PPM1FP49593 454 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 MECOMQ03112 1051 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 COL9A3Q14050 684 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SLC5A9Q2M3M2 681 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TTC39BQ5VTQ0 682 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ITPRIPL1Q6GPH6 555 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 KYAT3Q6YP21 454 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 IQCKQ8N0W5 287 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 DPF2Q92785 391 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 VCPIP1Q96JH7 1222 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 FAM167BQ9BTA0 163 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 DHX33Q9H6R0 707 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PIH1D3Q9NQM4 214 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TRIM10Q9UDY6 481 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 LEMD3Q9Y2U8 911 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 C4AP0C0L4 1744 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 C4BP0C0L5 1744 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SORBS3O60504 671 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 CSDE1O75534 798 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PTDSS1P48651 473 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PRIM2P49643 509 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PPIDQ08752 370 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 MEI1Q5TIA1 1274 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TTC33Q6PID6 262 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SYCE2Q6PIF2 218 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SH2D3CQ8N5H7 860 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 BLOC1S5Q8TDH9 187 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 FNIP1Q8TF40 1166 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PTPRN2Q92932 1015 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TSPAN17Q96FV3 270 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 NDNQ99608 321 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PLA2G12BQ9BX93 195 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ASPSCR1Q9BZE9 553 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 OLFML3Q9NRN5 406 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TMEM9Q9P0T7 183 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 WARS2Q9UGM6 360 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms