RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 CCDC42Q96M95 316 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 ZNF560Q96MR9 790 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 NLRC4Q9NPP4 1024 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 PUF60Q9UHX1 559 aaKnown RBP16.54■□□□□ 0.24
HNF4A-202ENST00000316673 NLRC5Q86WI3 1866 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 ANO9A1A5B4 782 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 ARHGEF37A1IGU5 675 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 KIF2AO00139 706 aaPredicted RBP16.54■□□□□ 0.24
HNF4A-202ENST00000316673 B3GAT3O94766 335 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 NOL4O94818 638 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 PIK3CAP42336 1068 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 CLCNKBP51801 687 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 UBE3AQ05086 875 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 ZACNQ401N2 412 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 C9orf57Q5W0N0 161 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 TMEM139Q8IV31 216 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 FBXO22Q8NEZ5 403 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 PLEKHO2Q8TD55 490 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 BAP1Q92560 729 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 POP1Q99575 1024 aaKnown RBP16.54■□□□□ 0.24
HNF4A-202ENST00000316673 AIPL1Q9NZN9 384 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 ADAM28Q9UKQ2 775 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 PYCARDQ9ULZ3 195 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 LZTS1Q9Y250 596 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 PRG3Q9Y2Y8 225 aaPredicted RBP16.54■□□□□ 0.24
HNF4A-202ENST00000316673 NUB1Q9Y5A7 615 aa16.54■□□□□ 0.24
HNF4A-202ENST00000316673 SF3B1O75533 1304 aaKnown RBP eCLIP16.53■□□□□ 0.24
HNF4A-202ENST00000316673 PTPRJQ12913 1337 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 SSU72P8A0A1W2PR75 194 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 SOX1O00570 391 aaPredicted RBP16.53■□□□□ 0.24
HNF4A-202ENST00000316673 PIRO00625 290 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 B4GALT3O60512 393 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 TADA2AO75478 443 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 TBXAS1P24557 533 aaPredicted RBP16.53■□□□□ 0.24
HNF4A-202ENST00000316673 GOLGA8FQ08AF8 430 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 GOLGA8DPQ0D2H9 430 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 TRPC3Q13507 836 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
HNF4A-202ENST00000316673 SPA17Q15506 151 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 TDRD12Q587J7 1177 aaKnown RBP16.53■□□□□ 0.24
HNF4A-202ENST00000316673 C1orf220Q5T0J3 134 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 LMBRD2Q68DH5 695 aaPredicted RBP16.53■□□□□ 0.24
HNF4A-202ENST00000316673 C1orf127Q8N9H9 656 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 OR5B17Q8NGF7 314 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 JAKMIP2Q96AA8 810 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 C17orf80Q9BSJ5 609 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 ZNF576Q9H609 170 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 GOLGA2P5Q9HBQ8 144 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.53■□□□□ 0.24
HNF4A-202ENST00000316673 HCSTQ9UBK5 93 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 DNAJC12Q9UKB3 198 aa16.53■□□□□ 0.24
HNF4A-202ENST00000316673 FGF18O76093 207 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 CLSTN1O94985 981 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 C4BPAP04003 597 aaKnown RBP16.52■□□□□ 0.23
HNF4A-202ENST00000316673 ITGB3P05106 788 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 KRT19P08727 400 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 ATICP31939 592 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 TAF6P49848 677 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 KLHL30Q0D2K2 578 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 SV2CQ496J9 727 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 C15orf39Q6ZRI6 1047 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 DDX53Q86TM3 631 aaKnown RBP16.52■□□□□ 0.23
HNF4A-202ENST00000316673 KLHL23Q8NBE8 558 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 ZNF516Q92618 1163 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 TAF4BQ92750 862 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 LRCH3Q96II8 777 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 FAXDC2Q96IV6 333 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 UBE2TQ9NPD8 197 aaPredicted RBP16.52■□□□□ 0.23
HNF4A-202ENST00000316673 AGAP1Q9UPQ3 857 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 FHOD1Q9Y613 1164 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 EPN1Q9Y6I3 576 aaPredicted RBP16.52■□□□□ 0.23
HNF4A-202ENST00000316673 KIAA1671Q9BY89 1806 aa16.52■□□□□ 0.23
HNF4A-202ENST00000316673 H3BNC9 293 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 EPHB6O15197 1021 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 GFPT2O94808 682 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 ARHGEF15O94989 841 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 KIF4AO95239 1232 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 STAU1O95793 577 aaKnown RBP16.51■□□□□ 0.23
HNF4A-202ENST00000316673 POLR2BP30876 1174 aaKnown RBP16.51■□□□□ 0.23
HNF4A-202ENST00000316673 GCNT1Q02742 428 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 ZNF697Q5TEC3 545 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 TDRD10Q5VZ19 366 aaKnown RBP16.51■□□□□ 0.23
HNF4A-202ENST00000316673 CCAR2Q8N163 923 aaKnown RBP16.51■□□□□ 0.23
HNF4A-202ENST00000316673 PPM1KQ8N3J5 372 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 PAAF1Q9BRP4 392 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 LMAN2LQ9H0V9 348 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 NHEJ1Q9H9Q4 299 aaPredicted RBP16.51■□□□□ 0.23
HNF4A-202ENST00000316673 SIX2Q9NPC8 291 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 SPTLC3Q9NUV7 552 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 MTUS1Q9ULD2 1270 aa16.51■□□□□ 0.23
HNF4A-202ENST00000316673 SOWAHDA6NJG2 315 aa16.5■□□□□ 0.23
HNF4A-202ENST00000316673 NT5C1B-RDH14C9J2C7 533 aa16.5■□□□□ 0.23
HNF4A-202ENST00000316673 AKR1B10O60218 316 aa16.5■□□□□ 0.23
HNF4A-202ENST00000316673 NDUFA10O95299 355 aa16.5■□□□□ 0.23
HNF4A-202ENST00000316673 HLA-DRAP01903 254 aa16.5■□□□□ 0.23
HNF4A-202ENST00000316673 P4HA1P13674 534 aa16.5■□□□□ 0.23
HNF4A-202ENST00000316673 SOX5P35711 763 aa16.5■□□□□ 0.23
HNF4A-202ENST00000316673 PBX3P40426 434 aa16.5■□□□□ 0.23
HNF4A-202ENST00000316673 GUCY2FP51841 1108 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms