RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 FBXO25Q8TCJ0 367 aa14.46□□□□□ -0.1
SPAST-201ENST00000315285 EPS8L3Q8TE67 593 aaKnown RBP14.46□□□□□ -0.1
SPAST-201ENST00000315285 PDCD6IPQ8WUM4 868 aaKnown RBP14.46□□□□□ -0.1
SPAST-201ENST00000315285 PCMTD2Q9NV79 361 aa14.46□□□□□ -0.1
SPAST-201ENST00000315285 ERFP50548 548 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 MDH1BQ5I0G3 518 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 PPIL6Q8IXY8 311 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 C3orf20Q8ND61 904 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 ELP3Q9H9T3 547 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 PLEKHA5Q9HAU0 1116 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 SP110Q9HB58 689 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.45□□□□□ -0.1
SPAST-201ENST00000315285 PSTPIP1O43586 416 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 SERPINB4P48594 390 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 EN1Q05925 392 aaPredicted RBP14.45□□□□□ -0.1
SPAST-201ENST00000315285 CYP4A22Q5TCH4 519 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 VGLL2Q8N8G2 317 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 C2orf69Q8N8R5 385 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 ICA1LQ8NDH6 482 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 DTX3LQ8TDB6 740 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 OLFML3Q9NRN5 406 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 MAGEB2O15479 319 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 SNRPAP09012 282 aaKnown RBP14.45□□□□□ -0.1
SPAST-201ENST00000315285 RARGP13631 454 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 STMN1P16949 149 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 BTBD8Q5XKL5 378 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 APPL2Q8NEU8 664 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 PRMT6Q96LA8 375 aaPredicted RBP14.45□□□□□ -0.1
SPAST-201ENST00000315285 FAM49BQ9NUQ9 324 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 AIPL1Q9NZN9 384 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 TNS2Q63HR2 1409 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 DFFAO00273 331 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 PSMC6P62333 389 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 TRIM62Q9BVG3 475 aa14.45□□□□□ -0.1
SPAST-201ENST00000315285 GPD1P21695 349 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 FAM71DQ8N9W8 422 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 XAB2Q9HCS7 855 aaKnown RBP14.44□□□□□ -0.1
SPAST-201ENST00000315285 KCND1Q9NSA2 647 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 PRMT7Q9NVM4 692 aaPredicted RBP14.44□□□□□ -0.1
SPAST-201ENST00000315285 RNF103-CHMP3A0A140T963 221 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 LRRC10BA6NIK2 292 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 DNAJC3Q13217 504 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 DNAL1Q4LDG9 190 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 C2CD6Q53TS8 623 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 GMCL1P1Q8NEA9 526 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 ACSF2Q96CM8 615 aaPredicted RBP14.44□□□□□ -0.1
SPAST-201ENST00000315285 MED15Q96RN5 788 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 SLC24A3Q9HC58 644 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 MYOZ2Q9NPC6 264 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 METTL5Q9NRN9 209 aaKnown RBP14.44□□□□□ -0.1
SPAST-201ENST00000315285 ABCF3Q9NUQ8 709 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 PDGFRBP09619 1106 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 GYS1P13807 737 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 CCND1P24385 295 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 CAP2P40123 477 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 NPTX2P47972 431 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 CNPY4Q8N129 248 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 C3orf70A6NLC5 250 aaPredicted RBP14.44□□□□□ -0.1
SPAST-201ENST00000315285 IL1R1P14778 569 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 ANGEL2Q5VTE6 544 aaKnown RBP14.44□□□□□ -0.1
SPAST-201ENST00000315285 SLC20A1Q8WUM9 679 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 AFG1LQ8WV93 481 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 ABTB1Q969K4 478 aaPredicted RBP14.44□□□□□ -0.1
SPAST-201ENST00000315285 NCLNQ969V3 563 aa14.44□□□□□ -0.1
SPAST-201ENST00000315285 DDTLA6NHG4 134 aaPredicted RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 IGF2BP3O00425 579 aaKnown RBP eCLIP14.43□□□□□ -0.1
SPAST-201ENST00000315285 GEMIN4P57678 1058 aaKnown RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 PRAMEF18Q5VWM3 479 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 DNAAF5Q86Y56 855 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 UBA3Q8TBC4 463 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 MTO1Q9Y2Z2 717 aaKnown RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 CAND2O75155 1236 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 TFRCP02786 760 aaKnown RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 HNRNPH1P31943 449 aaKnown RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 MEA1Q16626 185 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 RARS2Q5T160 578 aaKnown RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 CHST13Q8NET6 341 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 OR6J1Q8NGC5 347 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 ZC3H15Q8WU90 426 aaKnown RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 TLR10Q9BXR5 811 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 DEFB129Q9H1M3 183 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 RNF181Q9P0P0 153 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 MCF2P10911 925 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 ARHGEF6Q15052 776 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 MAPRE2Q15555 327 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 TMEM119Q4V9L6 283 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 BLOC1S4Q9NUP1 217 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 TRAF3IP3Q9Y228 551 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 ZC3H11AO75152 810 aaKnown RBP eCLIP14.43□□□□□ -0.1
SPAST-201ENST00000315285 SASH3O75995 380 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 CDC42EP1Q00587 391 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 TMEM259Q4ZIN3 620 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 EFCAB12Q6NXP0 572 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 NUDT12Q9BQG2 462 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 SARS2Q9NP81 518 aaKnown RBP14.43□□□□□ -0.1
SPAST-201ENST00000315285 WHRNQ9P202 907 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 SPATA31A6Q5VVP1 1343 aa14.43□□□□□ -0.1
SPAST-201ENST00000315285 ZBTB24O43167 697 aaPredicted RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 SETSIPP0DME0 302 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms