RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 KIAA0391O15091 583 aaKnown RBP15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 XYLBO75191 536 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 ITGB3P05106 788 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 ODC1P11926 461 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 PAX3P23760 479 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 GBP2P32456 591 aaPredicted RBP15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 ADCY1Q08828 1119 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 GPR17Q13304 367 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 TDGQ13569 410 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 MYBPC2Q14324 1141 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 LMBRD2Q68DH5 695 aaPredicted RBP15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 OVOS1Q6IE37 1185 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 DSTYKQ6XUX3 929 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 NELFCDQ8IXH7 590 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 ST13P5Q8NFI4 369 aaPredicted RBP15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 FGF14Q92915 247 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 PYM1Q9BRP8 204 aaKnown RBP15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 LRRC3Q9BY71 257 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 MTMR12Q9C0I1 747 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 CYP4F11Q9HBI6 524 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 IGSF9Q9P2J2 1179 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 CDH7Q9ULB5 785 aa15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 ARIH1Q9Y4X5 557 aaPredicted RBP15.77■□□□□ 0.12
PPP1CA-201ENST00000312989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 MTMR11A4FU01 709 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 RHOP08100 348 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 POLR2BP30876 1174 aaKnown RBP15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 TAF6P49848 677 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 EPHA5P54756 1037 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 VCPP55072 806 aaKnown RBP15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 TFAMQ00059 246 aaKnown RBP15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 KMT5BQ4FZB7 885 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 WSCD1Q658N2 575 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 CENPPQ6IPU0 288 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 STXBP4Q6ZWJ1 553 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 LIMS2Q7Z4I7 341 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 LRRTM3Q86VH5 581 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 SLC44A3Q8N4M1 653 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 PLEKHO2Q8TD55 490 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 OXCT2Q9BYC2 517 aaPredicted RBP15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 INTS13Q9NVM9 706 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 MAFFQ9ULX9 164 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 YIPF1Q9Y548 306 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 NUMBLQ9Y6R0 609 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 MUC6Q6W4X9 2439 aa15.76■□□□□ 0.11
PPP1CA-201ENST00000312989 KPNA7A9QM74 516 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 CYB561D2O14569 222 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 CPB1P15086 417 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 NPR3P17342 541 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 CEBPBP17676 345 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 DPYDQ12882 1025 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 PABPC1LQ4VXU2 614 aaKnown RBP15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 IER5LQ5T953 404 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 CWF19L1Q69YN2 538 aaKnown RBP15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 PARM1Q6UWI2 310 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 TMC8Q8IU68 726 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 CEP57L1Q8IYX8 460 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 HS6ST3Q8IZP7 471 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 FBXL6Q8N531 539 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 LRRC52Q8N7C0 313 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 ATAD1Q8NBU5 361 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 TMEM174Q8WUU8 243 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 PBXIP1Q96AQ6 731 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 TCEAL4Q96EI5 215 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 PGLYRP2Q96PD5 576 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 PKMYT1Q99640 499 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 SCAND2PQ9GZW5 306 aaPredicted RBP15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 ZCWPW1Q9H0M4 648 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 KCTD10Q9H3F6 313 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 USP25Q9UHP3 1055 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 L1RE1Q9UN81 338 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 POLIQ9UNA4 740 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 SCN1AP35498 2009 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 DOCK6Q96HP0 2047 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 CLIC2O15247 247 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 FCARP24071 287 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 SYKP43405 635 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 SNRPFP62306 86 aaKnown RBP15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 TWF1Q12792 350 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 DUSP4Q13115 394 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 SNRNP35Q16560 246 aaKnown RBP15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 KNOP1Q1ED39 458 aaKnown RBP15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 OSTM1Q86WC4 334 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 TMLHEQ9NVH6 421 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 DMAC2Q9NW81 257 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 GDAP2Q9NXN4 497 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 ITGA11Q9UKX5 1188 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 AGAP1Q9UPQ3 857 aa15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 ZFP37Q9Y6Q3 630 aaPredicted RBP15.75■□□□□ 0.11
PPP1CA-201ENST00000312989 NCANO14594 1321 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 ZNF233A6NK53 670 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 PRRG1O14668 218 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 HCRTO43612 131 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 MYL1P05976 194 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 ELF1P32519 619 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 PSMD6Q15008 389 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 CCDC142Q17RM4 750 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 SV2CQ496J9 727 aa15.74■□□□□ 0.11
PPP1CA-201ENST00000312989 KRBA2Q6ZNG9 492 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms