RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 ZNF746Q6NUN9 644 aaPredicted RBP11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 TRIM69Q86WT6 500 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 TRIM9Q9C026 710 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 TRABDQ9H4I3 376 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 NYAP2Q9P242 653 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 SKOR1P84550 965 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 SEPT5Q99719 369 aaPredicted RBP11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 HINFPQ9BQA5 517 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 EMILIN2Q9BXX0 1053 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 SLC13A1Q9BZW2 595 aa11.85□□□□□ -0.51
VCPIP1-201ENST00000310421 SUPT3HB4E1H0 165 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 LRG1P02750 347 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 PCYT1AP49585 367 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 POLD3Q15054 466 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TTLL9Q3SXZ7 439 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 MEFVO15553 781 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 MAPK1P28482 360 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SPRP35270 261 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 CSTF3Q12996 717 aaKnown RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 LRIG3Q6UXM1 1119 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 DHX40Q8IX18 779 aaKnown RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 NUDT12Q9BQG2 462 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 HEATR9A2RTY3 570 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 GSG1L2A8MUP6 293 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 RGS2P41220 211 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 KPNA1P52294 538 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SLC18A3Q16572 532 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 HIST2H2ACQ16777 129 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 HIST2H2AA3Q6FI13 130 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SLC44A5Q8NCS7 719 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 CELF1Q92879 486 aaKnown RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 NIF3L1Q9GZT8 377 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 GID8Q9NWU2 228 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 ZNF157P51786 506 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 E4F1Q66K89 784 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SYN2Q92777 582 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 RIT2Q99578 217 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 IMPDH2P12268 514 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TDRD10Q5VZ19 366 aaKnown RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 ZFYVE19Q96K21 471 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 USP42Q9H9J4 1324 aaKnown RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 HBP1O60381 514 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 PPP3CCP48454 512 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 CENPCQ03188 943 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 FAM47EQ6ZV65 393 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TRIM48Q8IWZ4 208 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 PCDHB2Q9Y5E7 798 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 PJA2O43164 708 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SLC20A1Q8WUM9 679 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 ANKEF1Q9NU02 776 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SLC30A1Q9Y6M5 507 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 PITPNM2Q9BZ72 1349 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SSU72P8A0A1W2PR75 194 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TRIM49P0CI25 452 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TRIM49CP0CI26 452 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 C16orf72Q14CZ0 275 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TTC39BQ5VTQ0 682 aaPredicted RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 PID1Q7Z2X4 250 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 GLYCTKQ8IVS8 523 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SPATA18Q8TC71 538 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 SEPT1Q8WYJ6 367 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 MRPL48Q96GC5 212 aaKnown RBP11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 KLHL11Q9NVR0 708 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 CD274Q9NZQ7 290 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TUBGCP4Q9UGJ1 667 aa11.84□□□□□ -0.51
VCPIP1-201ENST00000310421 TRPC5OSA6NMA1 111 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 ANXA9O76027 345 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 ITIH2P19823 946 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 GTF2H1P32780 548 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 MAGEA9P43362 315 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 KBTBD12Q3ZCT8 623 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 STAMBPL1Q96FJ0 436 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 SGSM3Q96HU1 749 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 SLC25A13Q9UJS0 675 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 DCTN4Q9UJW0 460 aa11.83□□□□□ -0.51
VCPIP1-201ENST00000310421 RHOBTB3O94955 611 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 SLC9A1P19634 815 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 CYP2C8P10632 490 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 GNL1P36915 607 aaPredicted RBP11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 FAM182BQ5T319 152 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 DEPDC1Q5TB30 811 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 ZMYM2Q9UBW7 1377 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 ASMTLO95671 621 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 NAPEPLDQ6IQ20 393 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 PABPC5Q96DU9 382 aaKnown RBP11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 C17orf102A2RUQ5 167 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 FAM47DPA6NHR8 397 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 FDFT1P37268 417 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 HIPK4Q8NE63 616 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 CCDC126Q96EE4 140 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 HES6Q96HZ4 224 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 AGAP1Q9UPQ3 857 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 C2orf81A6NN90 581 aa11.83□□□□□ -0.52
VCPIP1-201ENST00000310421 PRR23D1E9PI22 279 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms