RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CYP11A1P05108 521 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CCDC192P0DO97 292 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 P4HA1P13674 534 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 EPCAMP16422 314 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 HOXB8P17481 243 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 OR1D2P34982 312 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ARPP19P56211 112 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 DLG4P78352 724 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CLDN10P78369 228 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MRPS5P82675 430 aaKnown RBP11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 NCOA4Q13772 614 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CLUL1Q15846 466 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ZNF699Q32M78 642 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 DPCR1Q3MIW9 517 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 LIN9Q5TKA1 542 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TDRD10Q5VZ19 366 aaKnown RBP11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ANKRD54Q6NXT1 300 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CAVIN1Q6NZI2 390 aaKnown RBP11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TMEM184AQ6ZMB5 413 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 FILIP1Q7Z7B0 1213 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 VN1R2Q8NFZ6 395 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ZNF516Q92618 1163 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MMS19Q96T76 1030 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CLSTN3Q9BQT9 956 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SFXN1Q9H9B4 322 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 FBXL5Q9UKA1 691 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 DENND4AQ7Z401 1863 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 OR6C75A6NL08 312 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TGM5O43548 720 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 C1RP00736 705 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ELF1P32519 619 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 GTF2H1P32780 548 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 GCLMP48507 274 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MXI1P50539 228 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 RBM10P98175 930 aaKnown RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MYL7Q01449 175 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ROR1Q01973 937 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TFF2Q03403 129 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 DLX2Q07687 328 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SMAD4Q13485 552 aaKnown RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 KCNC3Q14003 757 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 STX1AQ16623 288 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 LEXMQ3ZCV2 418 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ZACNQ401N2 412 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ZNF667Q5HYK9 610 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CT47A1Q5JQC4 288 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 KRT39Q6A163 491 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SLC8B1Q6J4K2 584 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CES5AQ6NT32 575 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 RBM43Q6ZSC3 357 aaKnown RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 FRMD5Q7Z6J6 570 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ADGRF2Q8IZF7 708 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TMEM86AQ8N2M4 240 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TOP6BLQ8N6T0 577 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CXorf38Q8TB03 319 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SPATA18Q8TC71 538 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SLC22A17Q8WUG5 538 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 HDAC7Q8WUI4 952 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 DUSP9Q99956 384 aaKnown RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SRRTQ9BXP5 876 aaKnown RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 GZF1Q9H116 711 aaPredicted RBP11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PLEKHA4Q9H4M7 779 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TMEM8AQ9HCN3 771 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ANO10Q9NW15 660 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 GDAP2Q9NXN4 497 aa11.81□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PTPRDP23468 1912 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 N4BP1O75113 896 aaKnown RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 OAZ2O95190 189 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 STAU1O95793 577 aaKnown RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CST3P01034 146 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 HLA-DRAP01903 254 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 LTBRP36941 435 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MYL6P60660 151 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TSPY1Q01534 308 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 RAB33AQ14088 237 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MRPL58Q14197 206 aaKnown RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 WDR72Q3MJ13 1102 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 RARS2Q5T160 578 aaKnown RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 WSCD1Q658N2 575 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PTCRAQ6ISU1 281 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CCDC149Q6ZUS6 474 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SV2AQ7L0J3 742 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 DPH6Q7L8W6 267 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CREBRFQ8IUR6 639 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PDCL2Q8N4E4 241 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 KREMEN2Q8NCW0 462 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TAF4BQ92750 862 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MSLNLQ96KJ4 702 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 APOL5Q9BWW9 433 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 DDX43Q9NXZ2 648 aaKnown RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CLEC1BQ9P126 229 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TMEM63CQ9P1W3 806 aa11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MAGEC2Q9UBF1 373 aaPredicted RBP11.8□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 NXF1Q9UBU9 619 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms