RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 POLR2BP30876 1174 aaKnown RBP11.28□□□□□ -0.6
CLP1-201ENST00000302731 CTNNA1P35221 906 aaKnown RBP11.28□□□□□ -0.6
CLP1-201ENST00000302731 PEX5P50542 639 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 SP3Q02447 781 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 PRKCZQ05513 592 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 INCA1Q0VD86 236 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 MYO1EQ12965 1108 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 XKR4Q5GH76 650 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 PAXIP1Q6ZW49 1069 aaPredicted RBP11.28□□□□□ -0.6
CLP1-201ENST00000302731 RSPH3Q86UC2 560 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 CELF4Q9BZC1 486 aaKnown RBP11.28□□□□□ -0.6
CLP1-201ENST00000302731 TRIM6Q9C030 488 aaPredicted RBP11.28□□□□□ -0.6
CLP1-201ENST00000302731 STIM2Q9P246 746 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 NXF1Q9UBU9 619 aaKnown RBP11.28□□□□□ -0.6
CLP1-201ENST00000302731 L1RE1Q9UN81 338 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 PCDHA3Q9Y5H8 950 aa11.28□□□□□ -0.6
CLP1-201ENST00000302731 MYADML2A6NDP7 307 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 MYO1FO00160 1098 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 XPOTO43592 962 aaKnown RBP11.27□□□□□ -0.6
CLP1-201ENST00000302731 ADAMTS4O75173 837 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 CALCAP01258 141 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 RAD23BP54727 409 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.6
CLP1-201ENST00000302731 DEFB115Q30KQ5 88 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 DCAF12L1Q5VU92 463 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.6
CLP1-201ENST00000302731 HDXQ7Z353 690 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 EIF1ADQ8N9N8 165 aaKnown RBP11.27□□□□□ -0.6
CLP1-201ENST00000302731 BEST2Q8NFU1 509 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 TMEM40Q8WWA1 233 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 ALG3Q92685 438 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.6
CLP1-201ENST00000302731 PLVAPQ9BX97 442 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 EIF2AQ9BY44 585 aaKnown RBP11.27□□□□□ -0.6
CLP1-201ENST00000302731 FUT8Q9BYC5 575 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 SLITRK6Q9H5Y7 841 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 PARVAQ9NVD7 372 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 SNTG2Q9NY99 539 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 ANAPC7Q9UJX3 599 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 KIAA1257Q9ULG3 409 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 UBQLN1Q9UMX0 589 aaKnown RBP11.27□□□□□ -0.6
CLP1-201ENST00000302731 POLIQ9UNA4 740 aa11.27□□□□□ -0.6
CLP1-201ENST00000302731 M0QZ92 97 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 KRIT1O00522 736 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 MAP2K7O14733 419 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 SPOPO43791 374 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 SEC31AO94979 1220 aaKnown RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 CD4P01730 458 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 CFHP08603 1231 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 KCNE1P15382 129 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 BRD2P25440 801 aaKnown RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 HOXD10P28358 340 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 MAN1A1P33908 653 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 MRPS6P82932 125 aaKnown RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 TAP1Q03518 808 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 CACNB2Q08289 660 aaPredicted RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 MAMLD1Q13495 774 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 SCARA5Q6ZMJ2 495 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 WHAMMQ8TF30 809 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLP1-201ENST00000302731 TMEM176AQ96HP8 235 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 CAPNS2Q96L46 248 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 C11orf70Q9BRQ4 267 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 RNF216Q9NWF9 866 aaPredicted RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 DMGDHQ9UI17 866 aaKnown RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 STRIP2Q9ULQ0 834 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 BARX2Q9UMQ3 279 aaPredicted RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 PIN4Q9Y237 131 aaKnown RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.27□□□□□ -0.61
CLP1-201ENST00000302731 TRPV2Q9Y5S1 764 aa11.27□□□□□ -0.61
CLP1-201ENST00000302731 TRIP12Q14669 1992 aaPredicted RBP11.26□□□□□ -0.61
CLP1-201ENST00000302731 GOLGA6L10A0A0M3HER8 536 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 RECQL4O94761 1208 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 PROSCO94903 275 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 GNRH1P01148 92 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 FGGP02679 453 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 VDRP11473 427 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 ATF7P17544 494 aaPredicted RBP11.26□□□□□ -0.61
CLP1-201ENST00000302731 CYP3A5P20815 502 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 RWDD2BP57060 319 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
CLP1-201ENST00000302731 STILQ15468 1287 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 PTPROQ16827 1216 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 NBPF20Q3BBV1 942 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 ZNF394Q53GI3 561 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 UBXN11Q5T124 520 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 SEL1L2Q5TEA6 688 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 CXCL17Q6UXB2 119 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 MMS22LQ6ZRQ5 1243 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 SERINC5Q86VE9 423 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 PASD1Q8IV76 773 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 IFT20Q8IY31 132 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 SLC4A11Q8NBS3 891 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.26□□□□□ -0.61
CLP1-201ENST00000302731 FEZF2Q8TBJ5 459 aa11.26□□□□□ -0.61
CLP1-201ENST00000302731 TFAP2BQ92481 460 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms