RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TCP11Q8WWU5 503 aa23.3■■□□□ 1.32
TPM4-201ENST00000300933 IMPG2Q9BZV3 1241 aa23.3■■□□□ 1.32
TPM4-201ENST00000300933 CPSF3Q9UKF6 684 aaKnown RBP23.3■■□□□ 1.32
TPM4-201ENST00000300933 POLIQ9UNA4 740 aa23.3■■□□□ 1.32
TPM4-201ENST00000300933 BHMG1C9JSJ3 638 aaPredicted RBP23.3■■□□□ 1.32
TPM4-201ENST00000300933 NOMO3P69849 1222 aa23.3■■□□□ 1.32
TPM4-201ENST00000300933 FBXO25Q8TCJ0 367 aa23.3■■□□□ 1.32
TPM4-201ENST00000300933 A0A087WZ62 844 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 ASS1P00966 412 aaKnown RBP23.29■■□□□ 1.32
TPM4-201ENST00000300933 RPL7AP62424 266 aaKnown RBP23.29■■□□□ 1.32
TPM4-201ENST00000300933 CENPCQ03188 943 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 ARHGAP1Q07960 439 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 FUKQ8N0W3 1084 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 GPRC5AQ8NFJ5 357 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 FDXACB1Q9BRP7 624 aaPredicted RBP23.29■■□□□ 1.32
TPM4-201ENST00000300933 BTBD19C9JJ37 291 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 PHF2O75151 1096 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 PTGIRP43119 386 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 CDH8P55286 799 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 BPIFB4P59827 614 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 TRPC3Q13507 836 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 DUOXA2Q1HG44 320 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 LDLRAD1Q5T700 205 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 DUPD1Q68J44 220 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 ARFGAP2Q8N6H7 521 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 UHMK1Q8TAS1 419 aaKnown RBP23.29■■□□□ 1.32
TPM4-201ENST00000300933 CISHQ9NSE2 258 aa23.29■■□□□ 1.32
TPM4-201ENST00000300933 GPR25O00155 361 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 HOXC6P09630 235 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 TCF4P15884 667 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 MCL1Q07820 350 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 TRIP13Q15645 432 aaPredicted RBP23.28■■□□□ 1.32
TPM4-201ENST00000300933 ATP13A4Q4VNC1 1196 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 TAPT1Q6NXT6 567 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 FAM228AQ86W67 206 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 ZC3H15Q8WU90 426 aaKnown RBP23.28■■□□□ 1.32
TPM4-201ENST00000300933 L3MBTL3Q96JM7 780 aaPredicted RBP23.28■■□□□ 1.32
TPM4-201ENST00000300933 GINS2Q9Y248 185 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 LRRC37A2A6NM11 1700 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 DCDC2CA8MYV0 355 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 LGALS2P05162 132 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 TMEM191BP0C7N4 346 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 RPL21P46778 160 aaKnown RBP23.28■■□□□ 1.32
TPM4-201ENST00000300933 TAS2R40P59535 323 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 ZNF844Q08AG5 666 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 MAMLD1Q13495 774 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 SIX1Q15475 284 aaPredicted RBP23.28■■□□□ 1.32
TPM4-201ENST00000300933 TMC3Q7Z5M5 1100 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 WDR49Q8IV35 697 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 C1orf131Q8NDD1 294 aaKnown RBP23.28■■□□□ 1.32
TPM4-201ENST00000300933 SEC16BQ96JE7 1060 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 NOVA2Q9UNW9 492 aaKnown RBP23.28■■□□□ 1.32
TPM4-201ENST00000300933 AKT3Q9Y243 479 aa23.28■■□□□ 1.32
TPM4-201ENST00000300933 TRAPPC3O43617 180 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 FGFR4P22455 802 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 CTNNA2P26232 953 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 ANKRD20A8PQ5CZ79 823 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 MPZL3Q6UWV2 235 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 TFAP2BQ92481 460 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 FMO2Q99518 471 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 IFT122Q9HBG6 1241 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 ERAP1Q9NZ08 941 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 SLC12A6Q9UHW9 1150 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 ACKR2O00590 384 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 HBP1O60381 514 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 MBTD1Q05BQ5 628 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 ANKS1BQ7Z6G8 1248 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 CCDC50Q8IVM0 306 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 CDT1Q9H211 546 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 CHST7Q9NS84 486 aa23.27■■□□□ 1.32
TPM4-201ENST00000300933 CCL15-CCL14A0A0B4J2E2 113 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 C22orf31O95567 290 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 CCL15Q16663 113 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 RPAINQ86UA6 219 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 SEC14L1Q92503 715 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 ACSF2Q96CM8 615 aaPredicted RBP23.26■■□□□ 1.31
TPM4-201ENST00000300933 RAB17Q9H0T7 212 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 FZD8Q9H461 694 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 PTPRHQ9HD43 1115 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 RNF19AQ9NV58 838 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 TPX2Q9ULW0 747 aaKnown RBP23.26■■□□□ 1.31
TPM4-201ENST00000300933 H0YGN5 161 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 TLR3O15455 904 aaKnown RBP23.26■■□□□ 1.31
TPM4-201ENST00000300933 NFICP08651 508 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 TBXAS1P24557 533 aaPredicted RBP23.26■■□□□ 1.31
TPM4-201ENST00000300933 ENPEPQ07075 957 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 TMEM62Q0P6H9 643 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 GPR162Q16538 588 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 ZNF699Q32M78 642 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 CYP4A22Q5TCH4 519 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 MAMDC4Q6UXC1 1216 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 TSHZ1Q6ZSZ6 1077 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 ZNF677Q86XU0 584 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 KIRREL3Q8IZU9 778 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 ACTR5Q9H9F9 607 aaPredicted RBP23.26■■□□□ 1.31
TPM4-201ENST00000300933 FAM114A2Q9NRY5 505 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 TJP2Q9UDY2 1190 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 GGA2Q9UJY4 613 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 NFS1Q9Y697 457 aa23.26■■□□□ 1.31
TPM4-201ENST00000300933 GLTPD2A6NH11 291 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms