RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-204ENST00000300862 ETS1P14921 441 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 MARK3P27448 753 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 ARL2P36404 184 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 CAPSQ13938 189 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 STXBP2Q15833 593 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 TXNRD3NBQ6F5E7 133 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 VSTM1Q6UX27 236 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 TRAIPQ9BWF2 469 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 FHDC1Q9C0D6 1143 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-204ENST00000300862 STMN4Q9H169 189 aaPredicted RBP13.68□□□□□ -0.22
HIF3A-204ENST00000300862 NEU2Q9Y3R4 380 aa13.68□□□□□ -0.22
HIF3A-204ENST00000300862 CCT8L1PA6NM43 557 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 TCP11X1B4DZS4 312 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 F8VP50 259 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 OAZ1P54368 228 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 E2F5Q15329 346 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 PLEKHA7Q6IQ23 1121 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 SCARA5Q6ZMJ2 495 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 PIGWQ7Z7B1 504 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 TMEM130Q8N3G9 435 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 GRK7Q8WTQ7 553 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 PCYT2Q99447 389 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 CGRRF1Q99675 332 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 ROPN1BQ9BZX4 212 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-204ENST00000300862 MTMR12Q9C0I1 747 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 ROPN1Q9HAT0 212 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-204ENST00000300862 MRPL47Q9HD33 250 aaKnown RBP13.67□□□□□ -0.22
HIF3A-204ENST00000300862 FGFR1OP2Q9NVK5 253 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 ZNF112Q9UJU3 913 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 PARP14Q460N5 1801 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 SRGAP2CP0DJJ0 459 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 MYL6P60660 151 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 CCNG2Q16589 344 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 P3H1Q32P28 736 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
HIF3A-204ENST00000300862 SLFN12LQ6IEE8 588 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 CAPN12Q6ZSI9 719 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 CROCCP2Q86T23 111 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 FEZF2Q8TBJ5 459 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 MAGEC3Q8TD91 643 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 MAIP1Q8WWC4 291 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 MCEEQ96PE7 176 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 SAMD15Q9P1V8 674 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 DNPEPQ9ULA0 475 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.67□□□□□ -0.22
HIF3A-204ENST00000300862 IVNS1ABPQ9Y6Y0 642 aa13.67□□□□□ -0.22
HIF3A-204ENST00000300862 GSTTP1A0A1W2PQM5 241 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 PSTPIP1O43586 416 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 POTEJP0CG39 1038 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 UBA1P22314 1058 aaKnown RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 ZNF252P-AS1Q0IIN9 211 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 NFX1Q12986 1120 aaKnown RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 ZKSCAN8Q15776 578 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 MFSD7Q6UXD7 560 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 PHF13Q86YI8 300 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 SRRM1Q8IYB3 904 aaKnown RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 KATNAL2Q8IYT4 538 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 ANKS4BQ8N8V4 417 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 TRPM4Q8TD43 1214 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 PRPF31Q8WWY3 499 aaKnown RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 MIEF2Q96C03 454 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 SERPINB12Q96P63 405 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 R3HDMLQ9H3Y0 253 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 PHIPQ8WWQ0 1821 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 HGSO14964 777 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 ASAP2O43150 1006 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 MGRN1O60291 552 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 DNAJC8O75937 253 aaPredicted RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 BRAFP15056 766 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 RPS12P25398 132 aaKnown RBP13.66□□□□□ -0.22
HIF3A-204ENST00000300862 MAN1A1P33908 653 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 OSTNP61366 133 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 TGFB2P61812 414 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 OGDHQ02218 1023 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 CYP4A22Q5TCH4 519 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 TRIM50Q86XT4 487 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 HOMER3Q9NSC5 361 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 ABCF3Q9NUQ8 709 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 PARVAQ9NVD7 372 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 ADGRA2Q96PE1 1338 aa13.66□□□□□ -0.22
HIF3A-204ENST00000300862 KRT1P04264 644 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 MMP8P22894 467 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 TLDC1Q6P9B6 456 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 TRIM72Q6ZMU5 477 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 EP400NLQ6ZTU2 488 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 SYDE1Q6ZW31 735 aaPredicted RBP13.65□□□□□ -0.22
HIF3A-204ENST00000300862 LRRC71Q8N4P6 559 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 CCDC89Q8N998 374 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 EXD1Q8NHP7 514 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 MRRFQ96E11 262 aaKnown RBP13.65□□□□□ -0.22
HIF3A-204ENST00000300862 KLRG1Q96E93 195 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 C12orf42Q96LP6 360 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 C10orf88Q9H8K7 445 aa13.65□□□□□ -0.22
HIF3A-204ENST00000300862 NAALADL1Q9UQQ1 740 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms