RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 WTIPA6NIX2 430 aaPredicted RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 HNRNPCP07910 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 HSD17B3P37058 310 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 ZNF200P98182 395 aaPredicted RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 ZNF772Q68DY9 489 aaPredicted RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 ATPAF2Q8N5M1 289 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 FAM162AQ96A26 154 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 KCNA3P22001 575 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 HMOX2P30519 316 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 MAGEA4P43358 317 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 ARHGEF38Q9NXL2 777 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 CST8O60676 142 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 HERVK_113P62684 666 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 CAPRIN2Q6IMN6 1127 aaKnown RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 PRUNE1Q86TP1 453 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 CHSY1Q86X52 802 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 STK33Q9BYT3 514 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 RHBDL2Q9NX52 303 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 ABI2Q9NYB9 513 aaPredicted RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 ZNF70Q9UC06 446 aaPredicted RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 E9PCH4 1651 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 PMPCBO75439 489 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 OCM2P0CE71 109 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 OCMP0CE72 109 aaPredicted RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 ITGB6P18564 788 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 WEE1P30291 646 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 LRRC34Q8IZ02 419 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 TEKT4Q8WW24 435 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 NEUROG2Q9H2A3 272 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 DDX28Q9NUL7 540 aaKnown RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 PNMA3Q9UL41 463 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 STX3Q13277 289 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 TRIM60Q495X7 471 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 SLC44A2Q8IWA5 706 aaPredicted RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 TTC13Q8NBP0 860 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 SCG3Q8WXD2 468 aaKnown RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 MAGED4Q96JG8 741 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 TARS2Q9BW92 718 aaKnown RBP16.17■□□□□ 0.18
FNDC1-201ENST00000297267 KCTD10Q9H3F6 313 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 CRB1P82279 1406 aa16.17■□□□□ 0.18
FNDC1-201ENST00000297267 ANO9A1A5B4 782 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 BYSLQ13895 437 aaKnown RBP16.16■□□□□ 0.18
FNDC1-201ENST00000297267 SLC40A1Q9NP59 571 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 TMEM161AQ9NX61 479 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 CHUKO15111 745 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 ZCCHC18P0CG32 403 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 CTCFP49711 727 aaPredicted RBP16.16■□□□□ 0.18
FNDC1-201ENST00000297267 OCA2Q04671 838 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 SYTL3Q4VX76 610 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 C11orf63Q6NUN7 778 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 RCOR2Q8IZ40 523 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 PDLIM2Q96JY6 352 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 CAMSAP1Q5T5Y3 1602 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 GCLCP48506 637 aaPredicted RBP16.16■□□□□ 0.18
FNDC1-201ENST00000297267 PRR5LQ6MZQ0 368 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 BNIPLQ7Z465 357 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 SENP1Q9P0U3 644 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 ANGPT2O15123 496 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 ZNF286BP0CG31 522 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 WNK4Q96J92 1243 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 C7orf25Q9BPX7 421 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 PKP3Q9Y446 797 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 B2RBV5 119 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 TSPAN3O60637 253 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 MYL2P10916 166 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 CAPN6Q9Y6Q1 641 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 EARS2Q5JPH6 523 aaKnown RBP16.16■□□□□ 0.18
FNDC1-201ENST00000297267 AARS2Q5JTZ9 985 aaKnown RBP16.16■□□□□ 0.18
FNDC1-201ENST00000297267 TMED8Q6PL24 325 aaPredicted RBP16.16■□□□□ 0.18
FNDC1-201ENST00000297267 ACER1Q8TDN7 264 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 ABHD8Q96I13 439 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 RAD18Q9NS91 495 aa16.16■□□□□ 0.18
FNDC1-201ENST00000297267 TIMM13Q9Y5L4 95 aaPredicted RBP16.16■□□□□ 0.18
FNDC1-201ENST00000297267 ARP10275 920 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 EPHA7Q15375 998 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 ATF7IP2Q5U623 682 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 CES3Q6UWW8 571 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 FASTKD5Q7L8L6 764 aaKnown RBP16.15■□□□□ 0.18
FNDC1-201ENST00000297267 GGA3Q9NZ52 723 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.15■□□□□ 0.18
FNDC1-201ENST00000297267 ALG6Q9Y672 507 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 FAM187AA6NFU0 413 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 KDM1AO60341 852 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 DNAJC8O75937 253 aaPredicted RBP16.15■□□□□ 0.18
FNDC1-201ENST00000297267 TFE3P19532 575 aaPredicted RBP16.15■□□□□ 0.18
FNDC1-201ENST00000297267 SFNP31947 248 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 ACTR2P61160 394 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 USP13Q92995 863 aaPredicted RBP16.15■□□□□ 0.18
FNDC1-201ENST00000297267 PALMDQ9NP74 551 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 STAP1Q9ULZ2 295 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 MADDQ8WXG6 1647 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 PPP1R37O75864 691 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 FKBP9O95302 570 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 GNAT1P11488 350 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 PON1P27169 355 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 USP11P51784 963 aa16.15■□□□□ 0.18
FNDC1-201ENST00000297267 FKBP9P1Q75LS8 142 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms