RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 SPATA18Q8TC71 538 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 SNRNP27Q8WVK2 155 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 ATXN2LQ8WWM7 1075 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 JADE3Q92613 823 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 DCPSQ96C86 337 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 TRIM62Q9BVG3 475 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 RAVER2Q9HCJ3 691 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 MAD2L2Q9UI95 211 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 PJA2O43164 708 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 CST8O60676 142 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 DGAT1O75907 488 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 ZCCHC18P0CG32 403 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 OVGP1Q12889 678 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 TRIM16LQ309B1 348 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 TRMT5Q32P41 509 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 FEZF2Q8TBJ5 459 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 SCFD1Q8WVM8 642 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 LZICQ8WZA0 190 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 FAM111AQ96PZ2 611 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 CDC42EP4Q9H3Q1 356 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 SRP68Q9UHB9 627 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 ARAP3Q8WWN8 1544 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 CYP19A1P11511 503 aaPredicted RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 GFAPP14136 432 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 NFX1Q12986 1120 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 STX5Q13190 355 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 SMAD1Q15797 465 aaKnown RBP11.54□□□□□ -0.56
PBRM1-201ENST00000296302 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 KBTBD4Q9NVX7 518 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 LRCH1Q9Y2L9 728 aa11.54□□□□□ -0.56
PBRM1-201ENST00000296302 SRRM3A6NNA2 597 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 ATMINO43313 823 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 RPS6KA4O75676 772 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 POLBP06746 335 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 PON1P27169 355 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 RFX5P48382 616 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 MRPL28Q13084 256 aaKnown RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 LBRQ14739 615 aaKnown RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 RBBP7Q16576 425 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 KBTBD12Q3ZCT8 623 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 LMBRD2Q68DH5 695 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 THEM5Q8N1Q8 247 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 TERB1Q8NA31 727 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 ZNF507Q8TCN5 953 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 CNBD2Q96M20 576 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 ARHGAP20Q9P2F6 1191 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 MYO1DO94832 1006 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 CSF1RP07333 972 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 STIP1P31948 543 aaKnown RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 SSTR3P32745 418 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 SGSM1Q2NKQ1 1148 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 EAPPQ56P03 285 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 ACAD10Q6JQN1 1059 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 LRRC6Q86X45 466 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 RMDN2Q96LZ7 410 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 EPAS1Q99814 870 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 EGFL8Q99944 293 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 RNF146Q9NTX7 359 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 SLC24A2Q9UI40 661 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 A8MXQ7 604 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 WDR47O94967 919 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 APOA4P06727 396 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 THRAP10827 490 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 CACNB3P54284 484 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 NCOA4Q13772 614 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 ASAP3Q8TDY4 903 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 PARD3BQ8TEW8 1205 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 TRPC5OSA6NMA1 111 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 RPS6KA5O75582 802 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 HSD17B4P51659 736 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 CACNA2D1P54289 1103 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 PLOD1Q02809 727 aaPredicted RBP11.53□□□□□ -0.56
PBRM1-201ENST00000296302 FAM118BQ9BPY3 351 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 KLHL4Q9C0H6 718 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 NARFQ9UHQ1 456 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 TAGLN3Q9UI15 199 aa11.53□□□□□ -0.56
PBRM1-201ENST00000296302 HECW2Q9P2P5 1572 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.52□□□□□ -0.56
PBRM1-201ENST00000296302 ATP9AO75110 1047 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 CLPTM1O96005 669 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 PSMC3P17980 439 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 PTENP60484 403 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 FOXD4Q12950 439 aaPredicted RBP11.52□□□□□ -0.56
PBRM1-201ENST00000296302 NME3Q13232 169 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.56
PBRM1-201ENST00000296302 NUP93Q8N1F7 819 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 RNF217Q8TC41 542 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 ZNF446Q9NWS9 450 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 SCN3BQ9NY72 215 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 BCS1LQ9Y276 419 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 SUGT1Q9Y2Z0 365 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 ADGRA3Q8IWK6 1321 aa11.52□□□□□ -0.56
PBRM1-201ENST00000296302 ZBTB24O43167 697 aaPredicted RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 HLA-DPA1P20036 260 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 TCN1P20061 433 aaPredicted RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 NUDT2P50583 147 aa11.52□□□□□ -0.57
PBRM1-201ENST00000296302 TOB1P50616 345 aaPredicted RBP11.52□□□□□ -0.57
PBRM1-201ENST00000296302 WDR72Q3MJ13 1102 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms