RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 LPIN1Q14693 890 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 DAAM2Q86T65 1068 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 CAPZA3Q96KX2 299 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 PSMB7Q99436 277 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 ZSWIM1Q9BR11 485 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 UNC93B1Q9H1C4 597 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 CHORDC1Q9UHD1 332 aaPredicted RBP24.37■■□□□ 1.49
PTX3-201ENST00000295927 GTF3C4Q9UKN8 822 aa24.37■■□□□ 1.49
PTX3-201ENST00000295927 PACSIN2Q9UNF0 486 aaPredicted RBP24.37■■□□□ 1.49
PTX3-201ENST00000295927 TLR3O15455 904 aaKnown RBP24.36■■□□□ 1.49
PTX3-201ENST00000295927 BUB1BO60566 1050 aaPredicted RBP24.36■■□□□ 1.49
PTX3-201ENST00000295927 CYP1A2P05177 515 aa24.36■■□□□ 1.49
PTX3-201ENST00000295927 ZNF618Q5T7W0 954 aa24.36■■□□□ 1.49
PTX3-201ENST00000295927 C9orf57Q5W0N0 161 aa24.36■■□□□ 1.49
PTX3-201ENST00000295927 SYCE1Q8N0S2 351 aa24.36■■□□□ 1.49
PTX3-201ENST00000295927 WHAMMQ8TF30 809 aa24.36■■□□□ 1.49
PTX3-201ENST00000295927 PHF24Q9UPV7 400 aa24.36■■□□□ 1.49
PTX3-201ENST00000295927 A0A0U1RQG5 324 aaPredicted RBP24.35■■□□□ 1.49
PTX3-201ENST00000295927 ZSCAN20P17040 1043 aaPredicted RBP24.35■■□□□ 1.49
PTX3-201ENST00000295927 CXCR5P32302 372 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 NSFP46459 744 aaKnown RBP24.35■■□□□ 1.49
PTX3-201ENST00000295927 RAD23BP54727 409 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 PAK2Q13177 524 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 ERCC6LQ2NKX8 1250 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 MCOLN2Q8IZK6 566 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 LRRC52Q8N7C0 313 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 COG1Q8WTW3 980 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 TFAP2BQ92481 460 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 MMS19Q96T76 1030 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 PTPN22Q9Y2R2 807 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 BRCA2P51587 3418 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 KBTBD13C9JR72 458 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 XPOTO43592 962 aaKnown RBP24.35■■□□□ 1.49
PTX3-201ENST00000295927 CILPO75339 1184 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 CD4P01730 458 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 CALR3Q96L12 384 aaKnown RBP24.35■■□□□ 1.49
PTX3-201ENST00000295927 HMGXB4Q9UGU5 601 aa24.35■■□□□ 1.49
PTX3-201ENST00000295927 MEIS3P2A8K0S8 358 aa24.34■■□□□ 1.49
PTX3-201ENST00000295927 CAND2O75155 1236 aa24.34■■□□□ 1.49
PTX3-201ENST00000295927 PTPROQ16827 1216 aa24.34■■□□□ 1.49
PTX3-201ENST00000295927 PEX26Q7Z412 305 aa24.34■■□□□ 1.49
PTX3-201ENST00000295927 TWNKQ96RR1 684 aa24.34■■□□□ 1.49
PTX3-201ENST00000295927 ABCB6Q9NP58 842 aa24.34■■□□□ 1.49
PTX3-201ENST00000295927 CNOT8Q9UFF9 292 aaKnown RBP24.34■■□□□ 1.49
PTX3-201ENST00000295927 STXBP5LQ9Y2K9 1186 aa24.34■■□□□ 1.49
PTX3-201ENST00000295927 MTA2O94776 668 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 PAEPP09466 180 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 CKBP12277 381 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 ITGA4P13612 1032 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 DNA2P51530 1060 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 SOX4Q06945 474 aaPredicted RBP24.33■■□□□ 1.49
PTX3-201ENST00000295927 ORC1Q13415 861 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 RPS6KA1Q15418 735 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 MON1BQ7L1V2 547 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 RSRC2Q7L4I2 434 aaKnown RBP24.33■■□□□ 1.49
PTX3-201ENST00000295927 NT5DC3Q86UY8 548 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 CREG2Q8IUH2 290 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 HACE1Q8IYU2 909 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 SLC4A11Q8NBS3 891 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 UBXN4Q92575 508 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 NUP85Q9BW27 656 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 ELOVL4Q9GZR5 314 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 CTAGE15A4D2H0 777 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 ARVCFO00192 962 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 PIRO00625 290 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 PTGESO14684 152 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 MGEA5O60502 916 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 KIF4AO95239 1232 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 CTAGE8P0CG41 777 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 CD19P15391 556 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 CYP3A5P20815 502 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 INCA1Q0VD86 236 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 ELF2Q15723 593 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 CTAGE6Q86UF2 777 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 CTAGE4Q8IX94 777 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 TRIM11Q96F44 468 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 ZFP42Q96MM3 310 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 FAM124BQ9H5Z6 455 aaPredicted RBP24.33■■□□□ 1.49
PTX3-201ENST00000295927 BARX2Q9UMQ3 279 aaPredicted RBP24.33■■□□□ 1.49
PTX3-201ENST00000295927 PCDHGC3Q9UN70 934 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 SNX9Q9Y5X1 595 aa24.33■■□□□ 1.49
PTX3-201ENST00000295927 MYCP01106 439 aaPredicted RBP24.32■■□□□ 1.48
PTX3-201ENST00000295927 MYBL1P10243 752 aa24.32■■□□□ 1.48
PTX3-201ENST00000295927 CKAP4Q07065 602 aaKnown RBP24.32■■□□□ 1.48
PTX3-201ENST00000295927 DSC3Q14574 896 aa24.32■■□□□ 1.48
PTX3-201ENST00000295927 PHF13Q86YI8 300 aaPredicted RBP24.32■■□□□ 1.48
PTX3-201ENST00000295927 ZNF564Q8TBZ8 553 aaPredicted RBP24.32■■□□□ 1.48
PTX3-201ENST00000295927 GOLGA1Q92805 767 aa24.32■■□□□ 1.48
PTX3-201ENST00000295927 TMEM176AQ96HP8 235 aa24.32■■□□□ 1.48
PTX3-201ENST00000295927 GOLGA2P5Q9HBQ8 144 aa24.32■■□□□ 1.48
PTX3-201ENST00000295927 UVRAGQ9P2Y5 699 aa24.32■■□□□ 1.48
PTX3-201ENST00000295927 SQORQ9Y6N5 450 aa24.32■■□□□ 1.48
PTX3-201ENST00000295927 PDE2AO00408 941 aaPredicted RBP24.31■■□□□ 1.48
PTX3-201ENST00000295927 LSM8O95777 96 aaKnown RBP24.31■■□□□ 1.48
PTX3-201ENST00000295927 ATF7P17544 494 aaPredicted RBP24.31■■□□□ 1.48
PTX3-201ENST00000295927 C2CD6Q53TS8 623 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 PPP1R2P3Q6NXS1 205 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 MRPL10Q7Z7H8 261 aaKnown RBP24.31■■□□□ 1.48
PTX3-201ENST00000295927 TTC39CQ8N584 583 aa24.31■■□□□ 1.48
PTX3-201ENST00000295927 USP38Q8NB14 1042 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms