RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 TCHHL1Q5QJ38 904 aaPredicted RBP10.73□□□□□ -0.69
CLDN1-201ENST00000295522 DUS1LQ6P1R4 473 aaKnown RBP10.73□□□□□ -0.69
CLDN1-201ENST00000295522 OLFML1Q6UWY5 402 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 CTAGE3PQ8IX95 158 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 STKLD1Q8NE28 680 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 OXNAD1Q96HP4 312 aaPredicted RBP10.73□□□□□ -0.69
CLDN1-201ENST00000295522 PANX3Q96QZ0 392 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 PCDHA3Q9Y5H8 950 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 STRCQ7RTU9 1775 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 AKAP11Q9UKA4 1901 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 C15orf38-AP3S2A0A0A6YYH1 394 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 XPO1O14980 1071 aaKnown RBP10.73□□□□□ -0.69
CLDN1-201ENST00000295522 SGPL1O95470 568 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 MT-ND3P03897 115 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 SSTR1P30872 391 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 ZNF76P36508 570 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 TMPRSS15P98073 1019 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 CDK16Q00536 496 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 IKQ13123 557 aaPredicted RBP10.73□□□□□ -0.69
CLDN1-201ENST00000295522 HIC1Q14526 733 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 TMEM119Q4V9L6 283 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 LLGL2Q6P1M3 1020 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 ARPINQ7Z6K5 226 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 GALNT4Q8N4A0 578 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 ACAP3Q96P50 834 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 STRCP1A6NGW2 1772 aa10.73□□□□□ -0.69
CLDN1-201ENST00000295522 LOC100653049A0A140TA62 436 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 KRT34O76011 436 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 ALOX15P16050 662 aaPredicted RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 VCLP18206 1134 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 TMEM259Q4ZIN3 620 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 ZBTB8BQ8NAP8 495 aaPredicted RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 SHKBP1Q8TBC3 707 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 C7orf43Q8WVR3 580 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 NSUN4Q96CB9 384 aaKnown RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 DGCR14Q96DF8 476 aaKnown RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 TTC25Q96NG3 672 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 HAPLN3Q96S86 360 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 SLC7A8Q9UHI5 535 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 AK5Q9Y6K8 562 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 CAPN8A6NHC0 703 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 A8MXQ7 604 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 BMP3P12645 472 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 NELFEP18615 380 aaKnown RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 PMLP29590 882 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 SERPINB8P50452 374 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 ARSEP51690 589 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 BBS9Q3SYG4 887 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 CC2D2BQ6DHV5 1058 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 KLHDC10Q6PID8 442 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 ACAD11Q709F0 780 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 HOMEZQ8IX15 550 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 PALM2Q8IXS6 379 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 AZIN2Q96A70 460 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 CCDC127Q96BQ5 260 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 MAF1Q9H063 256 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 RPL26L1Q9UNX3 145 aaKnown RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 PDXKO00764 312 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 TFPTP0C1Z6 253 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 PABPC4LP0CB38 370 aaKnown RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 NAA20P61599 178 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 CNGA3Q16281 694 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 ANKRD23Q86SG2 305 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 TPH2Q8IWU9 490 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 ZNF384Q8TF68 577 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 PSMC3IPQ9P2W1 217 aaPredicted RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 MTO1Q9Y2Z2 717 aaKnown RBP10.72□□□□□ -0.69
CLDN1-201ENST00000295522 TSC22D4Q9Y3Q8 395 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 KAT6AQ92794 2004 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 C1orf167Q5SNV9 1468 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 LAMB4A4D0S4 1761 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 TNS3Q68CZ2 1445 aa10.72□□□□□ -0.69
CLDN1-201ENST00000295522 SGK1O00141 431 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 TRAFD1O14545 582 aaPredicted RBP10.71□□□□□ -0.69
CLDN1-201ENST00000295522 XPOTO43592 962 aaKnown RBP10.71□□□□□ -0.69
CLDN1-201ENST00000295522 ANXA13P27216 316 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 IL6STP40189 918 aaPredicted RBP10.71□□□□□ -0.69
CLDN1-201ENST00000295522 CHN2P52757 468 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 MARSP56192 900 aaKnown RBP10.71□□□□□ -0.69
CLDN1-201ENST00000295522 DYNLT1P63172 113 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 TRMT5Q32P41 509 aaKnown RBP10.71□□□□□ -0.69
CLDN1-201ENST00000295522 NADK2Q4G0N4 442 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 C11orf63Q6NUN7 778 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 TMPRSS6Q8IU80 811 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 ERMNQ8TAM6 284 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 PYROXD1Q8WU10 500 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 HAS1Q92839 578 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 ABHD8Q96I13 439 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 SLC13A1Q9BZW2 595 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 TMEM117Q9H0C3 514 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 HOMER2Q9NSB8 354 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 HSFX1Q9UBD0 423 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 SMIM31A0A1B0GVY4 71 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 NDC80O14777 642 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 PEX1O43933 1283 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 KRT10P13645 584 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 GJA8P48165 433 aa10.71□□□□□ -0.69
CLDN1-201ENST00000295522 UBAP2LQ14157 1087 aaKnown RBP10.71□□□□□ -0.69
CLDN1-201ENST00000295522 TFDP1Q14186 410 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms