RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 SETDB1Q15047 1291 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 TKFCQ3LXA3 575 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 EFHC2Q5JST6 749 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 AADACL2Q6P093 401 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 FAM83AQ86UY5 434 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 CEP57Q86XR8 500 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 SULF1Q8IWU6 871 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 PLCD3Q8N3E9 789 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 UBR7Q8N806 425 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 ANKLE1Q8NAG6 615 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 BANK1Q8NDB2 785 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 NSMCE1Q8WV22 266 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 LPAR1Q92633 364 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 SEMA4DQ92854 862 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 CCDC28BQ9BUN5 200 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 DDX23Q9BUQ8 820 aaKnown RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 FAM124BQ9H5Z6 455 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 BCAS3Q9H6U6 928 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 RNPEPL1Q9HAU8 725 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 KCNH7Q9NS40 1196 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 DDX56Q9NY93 547 aaKnown RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 ZMYND8Q9ULU4 1186 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 PPME1Q9Y570 386 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 RLFQ13129 1914 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 TCRBV5S1A1TA0A578 114 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 STAM2O75886 525 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 SMNDC1O75940 238 aaKnown RBP eCLIP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 GH2P01242 217 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 CALB2P22676 271 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 CNGA1P29973 690 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 YWHABP31946 246 aaKnown RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 COPB2P35606 906 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 CHKAP35790 457 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 ZNF132P52740 706 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 MGAT5Q09328 741 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 DBN1Q16643 649 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 LONRF1Q17RB8 773 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 ZACNQ401N2 412 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 CDCA2Q69YH5 1023 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 BZW1Q7L1Q6 419 aaKnown RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 APBB1IPQ7Z5R6 666 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 CHSY1Q86X52 802 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 ECHDC2Q86YB7 292 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 GPD1LQ8N335 351 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 ALLCQ8N6M5 410 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 PROCA1Q8NCQ7 364 aaPredicted RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 MCPH1Q8NEM0 835 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 CLEC4DQ8WXI8 215 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 GMLQ99445 158 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 VPS11Q9H270 941 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 SEPT11Q9NVA2 429 aaKnown RBP6.53□□□□□ -1.36
VCAM1-201ENST00000294728 ASIC3Q9UHC3 531 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 IP6K2Q9UHH9 426 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 BAIAP2L1Q9UHR4 511 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 ANAPC7Q9UJX3 599 aa6.53□□□□□ -1.36
VCAM1-201ENST00000294728 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 KLF11O14901 512 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 LIASO43766 372 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 EXTL3O43909 919 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 KRT16P08779 473 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 ACADSP16219 412 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 ACO1P21399 889 aaKnown RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 GBP2P32456 591 aaPredicted RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 MAGEA4P43358 317 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 CLNS1AP54105 237 aaKnown RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 WDR4P57081 412 aaKnown RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 KCNJ2P63252 427 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 TBC1D1Q86TI0 1168 aaPredicted RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 GPATCH11Q8N954 259 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 C10orf82Q8WW14 230 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 GPRASP2Q96D09 838 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 PITPNM3Q9BZ71 974 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 OSBPL8Q9BZF1 889 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 TRIM6Q9C030 488 aaPredicted RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 PCDH9Q9HC56 1237 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 CHST7Q9NS84 486 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 CYP39A1Q9NYL5 469 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 ARHGAP28Q9P2N2 729 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 ZBTB21Q9ULJ3 1066 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 KIAA1217Q5T5P2 1943 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 DOCK1Q14185 1865 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 CLGNO14967 610 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 PPP1R12AO14974 1030 aaPredicted RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 RAD21O60216 631 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 FKTNO75072 461 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 CSDE1O75534 798 aaKnown RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 TJP3O95049 919 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 STBD1O95210 358 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 CFBP00751 764 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 C4BPAP04003 597 aaKnown RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 CLTAP09496 248 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 DLATP10515 647 aaKnown RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 NOMO3P69849 1222 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 JAG1P78504 1218 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 DMP1Q13316 513 aaPredicted RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 KRT72Q14CN4 511 aa6.52□□□□□ -1.37
VCAM1-201ENST00000294728 OASLQ15646 514 aaKnown RBP6.52□□□□□ -1.37
VCAM1-201ENST00000294728 NBPF20Q3BBV1 942 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms