RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 TNFSF9P41273 254 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 GALCP54803 685 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 CFAP58Q5T655 872 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 TDRD10Q5VZ19 366 aaKnown RBP17.93■□□□□ 0.46
CPSF4-201ENST00000292476 EEF1DP3Q658K8 133 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 SLC27A1Q6PCB7 646 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 RPAINQ86UA6 219 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 SEMA4DQ92854 862 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 TSEN34Q9BSV6 310 aaKnown RBP17.93■□□□□ 0.46
CPSF4-201ENST00000292476 HTATIP2Q9BUP3 242 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 GPR88Q9GZN0 384 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 AMFRQ9UKV5 643 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 NFU1Q9UMS0 254 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 GINS2Q9Y248 185 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 ALPK3Q96L96 1907 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 MOXD2PA6NHM9 499 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 CEP104O60308 925 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 STAG3L1P0CL83 205 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 COL6A1P12109 1028 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 LRIG3Q6UXM1 1119 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 ARHGEF19Q8IW93 802 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 CTNNBL1Q8WYA6 563 aaPredicted RBP17.93■□□□□ 0.46
CPSF4-201ENST00000292476 DHX38Q92620 1227 aaKnown RBP17.93■□□□□ 0.46
CPSF4-201ENST00000292476 FAM212AQ96EL1 285 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 FAXDC2Q96IV6 333 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 ACAP3Q96P50 834 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 ZIM3Q96PE6 472 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 OSMRQ99650 979 aa17.93■□□□□ 0.46
CPSF4-201ENST00000292476 NOC2LQ9Y3T9 749 aaKnown RBP17.93■□□□□ 0.46
CPSF4-201ENST00000292476 FOXN3O00409 490 aaPredicted RBP17.92■□□□□ 0.46
CPSF4-201ENST00000292476 GRM5P41594 1212 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 TMEM62Q0P6H9 643 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 TRPC3Q13507 836 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 NCOA4Q13772 614 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 SNX17Q15036 470 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 SGSM1Q2NKQ1 1148 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 SEZ6Q53EL9 994 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 CCSAPQ6IQ19 270 aaPredicted RBP17.92■□□□□ 0.46
CPSF4-201ENST00000292476 DAAM2Q86T65 1068 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 HELQQ8TDG4 1101 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 SHC3Q92529 594 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 CPB2Q96IY4 423 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 TSPAN18Q96SJ8 248 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 NAP1L3Q99457 506 aaPredicted RBP17.92■□□□□ 0.46
CPSF4-201ENST00000292476 CELF4Q9BZC1 486 aaKnown RBP17.92■□□□□ 0.46
CPSF4-201ENST00000292476 PLEKHA5Q9HAU0 1116 aa17.92■□□□□ 0.46
CPSF4-201ENST00000292476 ANKRD62A6NC57 917 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 CSDE1O75534 798 aaKnown RBP17.91■□□□□ 0.46
CPSF4-201ENST00000292476 ATN1P54259 1190 aaPredicted RBP17.91■□□□□ 0.46
CPSF4-201ENST00000292476 BPIFB4P59827 614 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 HIC1Q14526 733 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 FAM47CQ5HY64 1035 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 MAATS1Q7Z4T9 603 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 RHOT2Q8IXI1 618 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 FAM71AQ8IYT1 594 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 CCDC26Q8TAB7 109 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 SEC14L1Q92503 715 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 LRRC45Q96CN5 670 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 SEZ6LQ9BYH1 1024 aa17.91■□□□□ 0.46
CPSF4-201ENST00000292476 TNFAIP3P21580 790 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 DNA2P51530 1060 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 YARSP54577 528 aaKnown RBP17.9■□□□□ 0.46
CPSF4-201ENST00000292476 MRPS6P82932 125 aaKnown RBP17.9■□□□□ 0.46
CPSF4-201ENST00000292476 ZNF200P98182 395 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-201ENST00000292476 LMBRD2Q68DH5 695 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-201ENST00000292476 SRLQ86TD4 932 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 SERINC5Q86VE9 423 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 IFT81Q8WYA0 676 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 GLT1D1Q96MS3 346 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 CAPS2Q9BXY5 557 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 TRIM6Q9C030 488 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-201ENST00000292476 CARD9Q9H257 536 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 DERAQ9Y315 318 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 C2CD2Q9Y426 696 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 TRPV2Q9Y5S1 764 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 SCN10AQ9Y5Y9 1956 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 DNAH12Q6ZR08 3092 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 MROH7Q68CQ1 1323 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 TMCO5BA8MYB1 307 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 KRIT1O00522 736 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 VNN1O95497 513 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 OSTNP61366 133 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 MRPS25P82663 173 aaKnown RBP17.9■□□□□ 0.46
CPSF4-201ENST00000292476 TFAMQ00059 246 aaKnown RBP17.9■□□□□ 0.46
CPSF4-201ENST00000292476 CDR2LQ86X02 465 aaPredicted RBP17.9■□□□□ 0.46
CPSF4-201ENST00000292476 GLYCTKQ8IVS8 523 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 OR5B17Q8NGF7 314 aa17.9■□□□□ 0.46
CPSF4-201ENST00000292476 PTPRJQ12913 1337 aa17.89■□□□□ 0.46
CPSF4-201ENST00000292476 SART1O43290 800 aaKnown RBP17.89■□□□□ 0.45
CPSF4-201ENST00000292476 LRRN2O75325 713 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 FAM153BP0C7A2 387 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 CXCL8P10145 99 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 HOXA11P31270 313 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-201ENST00000292476 USP8P40818 1118 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 ACLYP53396 1101 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 WNT7BP56706 349 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 MTMR3Q13615 1198 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 LRRC26Q2I0M4 334 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 FAM153CQ494X1 144 aa17.89■□□□□ 0.45
CPSF4-201ENST00000292476 TTMPQ5BVD1 217 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms