RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ASPAP45381 313 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 CBX1P83916 185 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 TUSC3Q13454 348 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 CMTR2Q8IYT2 770 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 TOP6BLQ8N6T0 577 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 ZNF689Q96CS4 500 aaPredicted RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 PLCD4Q9BRC7 762 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 GPR88Q9GZN0 384 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 HES2Q9Y543 173 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 F8VZ95 297 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 TACC1O75410 805 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 ITGB8P26012 769 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 STAT1P42224 750 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 OR8K1Q8NGG5 319 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 DYDC1Q8WWB3 177 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 FAM207AQ9NSI2 230 aaPredicted RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 TUBGCP4Q9UGJ1 667 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 PLAGL2Q9UPG8 496 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 EVI5O60447 810 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 SOX5P35711 763 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 TAF6P49848 677 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 PHLDB3Q6NSJ2 640 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 ZNF677Q86XU0 584 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 ARHGEF19Q8IW93 802 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 SHC3Q92529 594 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 DNAJC12Q9UKB3 198 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 FHOD1Q9Y613 1164 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 BNIP3LO60238 219 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 KIF4AO95239 1232 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 POLR2BP30876 1174 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 ZNF132P52740 706 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 POLR2FP61218 127 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 WDR5P61964 334 aaKnown RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 INCA1Q0VD86 236 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 UPP1Q16831 310 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 SFMBT2Q5VUG0 894 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 LMBRD2Q68DH5 695 aaPredicted RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 CYP26C1Q6V0L0 522 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 LRRC8AQ8IWT6 810 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 C7orf61Q8IZ16 206 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 SLC9A7Q96T83 725 aa9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 OXCT2Q9BYC2 517 aaPredicted RBP9.01□□□□□ -0.97
PTPDC1-201ENST00000288976 ZNF667Q5HYK9 610 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 RASIP1Q5U651 963 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 DCLRE1AQ6PJP8 1040 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 ZNF771Q7L3S4 317 aaPredicted RBP9□□□□□ -0.97
PTPDC1-201ENST00000288976 FAM71AQ8IYT1 594 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 TMEM86AQ8N2M4 240 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 PPM1EQ8WY54 764 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 LPPQ93052 612 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 TOP1MTQ969P6 601 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 HPDLQ96IR7 371 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 GAD1Q99259 594 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 APOBEC3GQ9HC16 384 aaKnown RBP9□□□□□ -0.97
PTPDC1-201ENST00000288976 BCCIPQ9P287 314 aaKnown RBP eCLIP9□□□□□ -0.97
PTPDC1-201ENST00000288976 DSEQ9UL01 958 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 PODXLO00592 558 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 EPHB6O15197 1021 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 SERPING1P05155 500 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 FXR1P51114 621 aaKnown RBP eCLIP9□□□□□ -0.97
PTPDC1-201ENST00000288976 SCNN1GP51170 649 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 BPIFB4P59827 614 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 MYL6P60660 151 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 PPP1R2P3Q6NXS1 205 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 TMTC1Q8IUR5 882 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 COLGALT2Q8IYK4 626 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 MTIF3Q9H2K0 278 aaKnown RBP9□□□□□ -0.97
PTPDC1-201ENST00000288976 KCND1Q9NSA2 647 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 SSU72P8A0A1W2PR75 194 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 LRRC53A6NM62 1247 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 DGKIO75912 1065 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 CSF2RAP15509 400 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 TNNC1P63316 161 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 ASIC2Q16515 512 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 DEFB128Q7Z7B8 93 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 CCDC170Q8IYT3 715 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 UBE2TQ9NPD8 197 aaPredicted RBP9□□□□□ -0.97
PTPDC1-201ENST00000288976 AGAP1Q9UPQ3 857 aa9□□□□□ -0.97
PTPDC1-201ENST00000288976 M0QZQ0 153 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 FGBP02675 491 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 CYP11A1P05108 521 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 PAEPP09466 180 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 ACO1P21399 889 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 WARSP23381 471 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 COL13A1Q5TAT6 717 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 UNC93AQ86WB7 457 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 TTC30BQ8N4P2 665 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 CRACR2AQ9BSW2 395 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 TBC1D13Q9NVG8 400 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 KLK14Q9P0G3 267 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 TTC3P53804 2025 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 NDC80O14777 642 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 DAPK3O43293 454 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 URI1O94763 535 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 TYMPP19971 482 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 PAFAH1B1P43034 410 aa8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 HTRA4P83105 476 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 SOX4Q06945 474 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-201ENST00000288976 CFAP58Q5T655 872 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms