RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 ACAT2Q9BWD1 397 aa3□□□□□ -1.93
CHD1-201ENST00000284049 PAIP1Q9H074 479 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 PREBQ9HCU5 417 aa3□□□□□ -1.93
CHD1-201ENST00000284049 TMEM140Q9NV12 185 aa3□□□□□ -1.93
CHD1-201ENST00000284049 NAP1L2Q9ULW6 460 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 RWDD3Q9Y3V2 267 aa3□□□□□ -1.93
CHD1-201ENST00000284049 NEXMIFQ5QGS0 1516 aa3□□□□□ -1.93
CHD1-201ENST00000284049 TMEM232C9JQI7 657 aa3□□□□□ -1.93
CHD1-201ENST00000284049 M0R082 166 aa3□□□□□ -1.93
CHD1-201ENST00000284049 HGSO14964 777 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 WDR46O15213 610 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 CRCPO75575 148 aa3□□□□□ -1.93
CHD1-201ENST00000284049 THEGLP0DJG4 465 aa3□□□□□ -1.93
CHD1-201ENST00000284049 NNMTP40261 264 aa3□□□□□ -1.93
CHD1-201ENST00000284049 SSR1P43307 286 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 NOMO3P69849 1222 aa3□□□□□ -1.93
CHD1-201ENST00000284049 SCAPQ12770 1279 aa3□□□□□ -1.93
CHD1-201ENST00000284049 C1orf122Q6ZSJ8 110 aa3□□□□□ -1.93
CHD1-201ENST00000284049 FBXL6Q8N531 539 aa3□□□□□ -1.93
CHD1-201ENST00000284049 WDR60Q8WVS4 1066 aa3□□□□□ -1.93
CHD1-201ENST00000284049 BRI3BPQ8WY22 251 aa3□□□□□ -1.93
CHD1-201ENST00000284049 UTP4Q969X6 686 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 CLPTM1LQ96KA5 538 aa3□□□□□ -1.93
CHD1-201ENST00000284049 KLF16Q9BXK1 252 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 RABEP2Q9H5N1 569 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ABCF3Q9NUQ8 709 aa3□□□□□ -1.93
CHD1-201ENST00000284049 DUSP13Q9UII6 198 aa3□□□□□ -1.93
CHD1-201ENST00000284049 TUBD1Q9UJT1 453 aa3□□□□□ -1.93
CHD1-201ENST00000284049 NAGPAQ9UK23 515 aa3□□□□□ -1.93
CHD1-201ENST00000284049 SMC3Q9UQE7 1217 aa3□□□□□ -1.93
CHD1-201ENST00000284049 IQGAP1P46940 1657 aa3□□□□□ -1.93
CHD1-201ENST00000284049 A2ML1A8K2U0 1454 aa3□□□□□ -1.93
CHD1-201ENST00000284049 AREL1O15033 823 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CCNT2O60583 730 aaKnown RBP3□□□□□ -1.93
CHD1-201ENST00000284049 ENDOD1O94919 500 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ARIH2O95376 493 aa3□□□□□ -1.93
CHD1-201ENST00000284049 GGPS1O95749 300 aa3□□□□□ -1.93
CHD1-201ENST00000284049 GUCA1CO95843 209 aa3□□□□□ -1.93
CHD1-201ENST00000284049 ERCC2P18074 760 aa3□□□□□ -1.93
CHD1-201ENST00000284049 PSMC4P43686 418 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CAPZA2P47755 286 aa3□□□□□ -1.93
CHD1-201ENST00000284049 CYP27A1Q02318 531 aa3□□□□□ -1.93
CHD1-201ENST00000284049 KRT40Q6A162 431 aa3□□□□□ -1.93
CHD1-201ENST00000284049 GALNT5Q7Z7M9 940 aa3□□□□□ -1.93
CHD1-201ENST00000284049 RASGRP3Q8IV61 690 aa3□□□□□ -1.93
CHD1-201ENST00000284049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3□□□□□ -1.93
CHD1-201ENST00000284049 CCDC114Q96M63 670 aa3□□□□□ -1.93
CHD1-201ENST00000284049 RWDD1Q9H446 243 aaPredicted RBP3□□□□□ -1.93
CHD1-201ENST00000284049 USP32Q8NFA0 1604 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 BTBD11A6QL63 1104 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 EFCAB8A8MWE9 144 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 AHCYL1O43865 530 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 TNFRSF6BO95407 300 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 PORP16435 677 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 MAPK3P27361 379 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 BMP8BP34820 402 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CAP2P40123 477 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CARSP49589 748 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 CSHL1Q14406 222 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 MAP3K21Q5TCX8 1036 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 PAOXQ6QHF9 649 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 RAB11FIP2Q7L804 512 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 PACSIN1Q9BY11 444 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 DNAI2Q9GZS0 605 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CNTD2Q9H8S5 307 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 HPF1Q9NWY4 346 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ADPRHL2Q9NX46 363 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 AKAP7Q9P0M2 348 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 CFAP97Q9P2B7 532 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 SERPINB13Q9UIV8 391 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ANKRD30BQ9BXX2 1392 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 TNPO2O14787 897 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 GPR32O75388 356 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 TPH1P17752 444 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 FPR2P25090 351 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ECE1P42892 770 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 RPS16P62249 146 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 SOX4Q06945 474 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 SLBPQ14493 270 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD1-201ENST00000284049 PKDCCQ504Y2 493 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 FAXCQ5TGI0 409 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 DMRTC2Q8IXT2 367 aaPredicted RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 OTUD6BQ8N6M0 293 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 UTP15Q8TED0 518 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 ZFPM2Q8WW38 1151 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 THAP4Q8WY91 577 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 TMOD4Q9NZQ9 345 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 LOC102723971A0A1B0GUV8 181 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 TMPRSS2O15393 492 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 ARHGAP6O43182 974 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 TADA3O75528 432 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 CD1AP06126 327 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 MTHFD1P11586 935 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 RAC2P15153 192 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 SMAD3P84022 425 aaKnown RBP2.99□□□□□ -1.93
CHD1-201ENST00000284049 HHIPL2Q6UWX4 724 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 KIAA0319LQ8IZA0 1049 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 GDAP1Q8TB36 358 aa2.99□□□□□ -1.93
CHD1-201ENST00000284049 DEPDC1BQ8WUY9 529 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms