RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TRIP4Q15650 581 aaPredicted RBP21.27■■□□□ 1
CACNA1B-201ENST00000277549 C16orf62Q7Z3J2 963 aa21.27■■□□□ 1
CACNA1B-201ENST00000277549 SENP7Q9BQF6 1050 aa21.27■■□□□ 1
CACNA1B-201ENST00000277549 CPA4Q9UI42 421 aa21.27■■□□□ 1
CACNA1B-201ENST00000277549 CPSF4O95639 269 aaKnown RBP21.27■□□□□ 0.99
CACNA1B-201ENST00000277549 HIST2H2ACQ16777 129 aaPredicted RBP21.27■□□□□ 0.99
CACNA1B-201ENST00000277549 HIST2H2AA3Q6FI13 130 aa21.27■□□□□ 0.99
CACNA1B-201ENST00000277549 BRINP3Q76B58 766 aa21.27■□□□□ 0.99
CACNA1B-201ENST00000277549 DDI1Q8WTU0 396 aa21.27■□□□□ 0.99
CACNA1B-201ENST00000277549 KLF6Q99612 283 aaPredicted RBP21.27■□□□□ 0.99
CACNA1B-201ENST00000277549 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 AIM2O14862 343 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 TSPAN3O60637 253 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 VTNP04004 478 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 YWHAZP63104 245 aaKnown RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 ZNF177Q13360 481 aaPredicted RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 NT5DC4Q86YG4 428 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 ZC3H15Q8WU90 426 aaKnown RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 MED15Q96RN5 788 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 AGPAT1Q99943 283 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 SPATS2LQ9NUQ6 558 aaKnown RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 FHOD1Q9Y613 1164 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 ATP7AQ04656 1500 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 ZBTB39O15060 712 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 TBC1D4O60343 1298 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 RESTQ13127 1097 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 SNX8Q9Y5X2 465 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 RNASEH1O60930 286 aaKnown RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 HNRNPCP07910 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 MYBL1P10243 752 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 WNK4Q96J92 1243 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 UNKQ9C0B0 810 aaKnown RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 ZNF70Q9UC06 446 aaPredicted RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 TEDDM1Q5T9Z0 273 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 ZNF438Q7Z4V0 828 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 SPATA18Q8TC71 538 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 NUDT14O95848 222 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 PRKCEQ02156 737 aa21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 ZC2HC1CQ53FD0 456 aaPredicted RBP21.26■□□□□ 0.99
CACNA1B-201ENST00000277549 MYL2P10916 166 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 EPHA10Q5JZY3 1008 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 LUZP2Q86TE4 346 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 RGL4Q8IZJ4 473 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 FAM20AQ96MK3 541 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 EPC1Q9H2F5 836 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 PIF1Q9H611 641 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 CKMP06732 381 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 CETPP11597 493 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 FEN1P39748 380 aaKnown RBP21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 LONRF1Q17RB8 773 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 MED8Q96G25 268 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 PNMA5Q96PV4 448 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 SENP2Q9HC62 589 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 ZNF711Q9Y462 761 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 DCDC2CA8MYV0 355 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 GLT1D1Q96MS3 346 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 LIMA1Q9UHB6 759 aaKnown RBP21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 DIS3Q9Y2L1 958 aaKnown RBP21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 KDM1AO60341 852 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 DPEP1P16444 411 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 SEMA3FQ13275 785 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 ITGB3P05106 788 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 RAP1GAPP47736 663 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 MAP3K10Q02779 954 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 CAMK2GQ13555 558 aaPredicted RBP21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 STARD3Q14849 445 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 C16orf72Q14CZ0 275 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 PTPRHQ9HD43 1115 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 CHMP2BQ9UQN3 213 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 TMEM132BQ14DG7 1078 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 TSC22D3Q99576 134 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 CATSPERBQ9H7T0 1116 aa21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 MRPL40Q9NQ50 206 aaKnown RBP21.25■□□□□ 0.99
CACNA1B-201ENST00000277549 MYO1CO00159 1063 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 SRP72O76094 671 aaKnown RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 PLA2G4AP47712 749 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 PLOD1Q02809 727 aaPredicted RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 TEX33O43247 280 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 ACTN3Q08043 901 aaPredicted RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 FOXN1O15353 648 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 ALDH9A1P49189 494 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 SLC24A3Q9HC58 644 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 DBR1Q9UK59 544 aaKnown RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 PCYT1AP49585 367 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 POU4F1Q01851 419 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 LLGL2Q6P1M3 1020 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 C4orf33Q8N1A6 199 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 ZNF512BQ96KM6 892 aaPredicted RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 ENO2P09104 434 aaPredicted RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 MAP3K7CLP57077 242 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 ARL6IP4Q66PJ3 421 aaKnown RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 SLITRK1Q96PX8 696 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 PANX2Q96RD6 677 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 CLCN6P51797 869 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 IPCEF1Q8WWN9 437 aaPredicted RBP21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 DEPDC7Q96QD5 511 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 MYOZ2Q9NPC6 264 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 BARHL2Q9NY43 387 aa21.24■□□□□ 0.99
CACNA1B-201ENST00000277549 EFNA5P52803 228 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms