RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.44□□□□□ -0.42
SHPRH-201ENST00000275233 OR2W6PQ8NHA6 318 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 SPATA18Q8TC71 538 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 ENTPD7Q9NQZ7 604 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 NEU2Q9Y3R4 380 aa12.44□□□□□ -0.42
SHPRH-201ENST00000275233 ZNF263O14978 683 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 MAGEB2O15479 319 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 CHRM3P20309 590 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 ALDH7A1P49419 539 aaKnown RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 TJAP1Q5JTD0 557 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 ZNF34Q8IZ26 560 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 TIPINQ9BVW5 301 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 SHCBP1LQ9BZQ2 653 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 SPATS2LQ9NUQ6 558 aaKnown RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 SLC38A7Q9NVC3 462 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 C6orf203Q9P0P8 240 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 ARHGAP26Q9UNA1 814 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 MRFAP1Q9Y605 127 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 PHF2O75151 1096 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 PBLDP30039 288 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 PIGHQ14442 188 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 NOTUMQ6P988 496 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 DTX3LQ8TDB6 740 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 ZC3H15Q8WU90 426 aaKnown RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 NYAP2Q9P242 653 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 LRRC7Q96NW7 1537 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 JCADQ9P266 1359 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 ENTPD3O75355 529 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 ATP5HO75947 161 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 IL18RAPO95256 599 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 VPS72Q15906 364 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 GRAMD4Q6IC98 578 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 USP49Q70CQ1 688 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 RBM15Q96T37 977 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 C7orf25Q9BPX7 421 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 RAD18Q9NS91 495 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 CDC42BPBQ9Y5S2 1711 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 GPD1P21695 349 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 RAD23BP54727 409 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 FCGRTP55899 365 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 CDC42EP1Q00587 391 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 SH2D3CQ8N5H7 860 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 TMCO5AQ8N6Q1 288 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 OTUB1Q96FW1 271 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 PNMA8BQ9ULN7 279 aaPredicted RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 A0A1W2PQC6 194 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 IL10P22301 178 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 C2CD6Q53TS8 623 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 TEDDM1Q5T9Z0 273 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 FAXCQ5TGI0 409 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 TDRD10Q5VZ19 366 aaKnown RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 MTHFD1LQ6UB35 978 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 RNF180Q86T96 592 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 DCP1BQ8IZD4 617 aaKnown RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 CATSPERBQ9H7T0 1116 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
SHPRH-201ENST00000275233 DPP3Q9NY33 737 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 SPATA31A1Q5TZJ5 1347 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 RFX7Q2KHR2 1363 aa12.43□□□□□ -0.42
SHPRH-201ENST00000275233 EXTL3O43909 919 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 KRT4P19013 534 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 RFC5P40937 340 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 RAP1GAPP47736 663 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 RPS6P62753 249 aaKnown RBP12.42□□□□□ -0.42
SHPRH-201ENST00000275233 SREBF2Q12772 1141 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 SLC18A3Q16572 532 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 FAM71DQ8N9W8 422 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 FAM136AQ96C01 138 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 C17orf80Q9BSJ5 609 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 GPRC5CQ9NQ84 441 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 NDE1Q9NXR1 346 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 MYL2P10916 166 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 PLIN5Q00G26 463 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 HHIPL2Q6UWX4 724 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 SEPT8Q92599 483 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 TAL1P17542 331 aaPredicted RBP12.42□□□□□ -0.42
SHPRH-201ENST00000275233 WEE1P30291 646 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 CDH18Q13634 790 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 ARMC6Q6NXE6 501 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 OR9Q1Q8NGQ5 310 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 CELF4Q9BZC1 486 aaKnown RBP12.42□□□□□ -0.42
SHPRH-201ENST00000275233 HBP1O60381 514 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 SLC25A27O95847 323 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 COMTP21964 271 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 PGM1P36871 562 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 KCNJ1P48048 391 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 RFX3P48380 749 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 SF3B3Q15393 1217 aaKnown RBP12.42□□□□□ -0.42
SHPRH-201ENST00000275233 PITPNM2Q9BZ72 1349 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 PMPCBO75439 489 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 FKBP9O95302 570 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 FAM200BP0CF97 657 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 ZNF200P98182 395 aaPredicted RBP12.42□□□□□ -0.42
SHPRH-201ENST00000275233 LAYNQ6UX15 382 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 FKBP9P1Q75LS8 142 aa12.42□□□□□ -0.42
SHPRH-201ENST00000275233 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
SHPRH-201ENST00000275233 CINPQ9BW66 212 aaPredicted RBP12.42□□□□□ -0.42
SHPRH-201ENST00000275233 CACNA2D2Q9NY47 1150 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms