RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 FBXO27Q8NI29 283 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 CCDC110Q8TBZ0 833 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 PLEKHA8Q96JA3 519 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 C2orf49Q9BVC5 232 aaPredicted RBP9.71□□□□□ -0.86
PDGFC-201ENST00000274071 PIH1D3Q9NQM4 214 aaKnown RBP9.71□□□□□ -0.86
PDGFC-201ENST00000274071 SLC7A8Q9UHI5 535 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 MOSPD1Q9UJG1 213 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 PCDHGA3Q9Y5H0 932 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 SLC4A4Q9Y6R1 1079 aa9.71□□□□□ -0.86
PDGFC-201ENST00000274071 COL14A1Q05707 1796 aaKnown RBP9.7□□□□□ -0.86
PDGFC-201ENST00000274071 MCF2LO15068 1137 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 KMOO15229 486 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ZBTB11O95625 1053 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-201ENST00000274071 FGFR1P11362 822 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 PMLP29590 882 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 NR1H2P55055 460 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 XIAPP98170 497 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 FOXO4P98177 505 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 UBE4AQ14139 1066 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 PPP2R5EQ16537 467 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 PDK4Q16654 411 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 MAN2A1Q16706 1144 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 DCAF12L1Q5VU92 463 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ITPRIPL1Q6GPH6 555 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ITIH5Q86UX2 942 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 DNAJC10Q8IXB1 793 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ZNF280CQ8ND82 737 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 DENND1AQ8TEH3 1009 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 SH3RF3Q8TEJ3 882 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-201ENST00000274071 GDPD5Q8WTR4 605 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 CHPT1Q8WUD6 406 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 PYDC1Q8WXC3 89 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 APPBP2Q92624 585 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 GPAMQ9HCL2 828 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ARPP21Q9UBL0 812 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-201ENST00000274071 PARP2Q9UGN5 583 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 CPA2P48052 419 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 CDK9P50750 372 aaKnown RBP9.7□□□□□ -0.86
PDGFC-201ENST00000274071 RPL26P61254 145 aaKnown RBP9.7□□□□□ -0.86
PDGFC-201ENST00000274071 TIMM10P62072 90 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 KLHL30Q0D2K2 578 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 CYP2A13Q16696 494 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ZNF829Q3KNS6 432 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-201ENST00000274071 TMEM67Q5HYA8 995 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 C1orf146Q5VVC0 180 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 KAZNQ674X7 775 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 IYDQ6PHW0 289 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ANKRD35Q8N283 1001 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 GALNT4Q8N4A0 578 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 RFWD2Q8NHY2 731 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 DDI1Q8WTU0 396 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ART4Q93070 314 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 BTBD9Q96Q07 612 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 GCNAQ96QF7 691 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 MKNK1Q9BUB5 465 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 SPZ1Q9BXG8 430 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 PARVGQ9HBI0 331 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 S100A14Q9HCY8 104 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 FBXO6Q9NRD1 293 aaPredicted RBP9.7□□□□□ -0.86
PDGFC-201ENST00000274071 SACM1LQ9NTJ5 587 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 APPL1Q9UKG1 709 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 POU2F3Q9UKI9 436 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 ZBTB1Q9Y2K1 713 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 WNK3Q9BYP7 1800 aa9.7□□□□□ -0.86
PDGFC-201ENST00000274071 B2RBV5 119 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 RSPH10B2B2RC85 870 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ANKRD63C9JTQ0 380 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 CDK2AP1O14519 115 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 DENRO43583 198 aaKnown RBP9.69□□□□□ -0.86
PDGFC-201ENST00000274071 FKBP6O75344 327 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 STAM2O75886 525 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 FARP2O94887 1054 aaPredicted RBP9.69□□□□□ -0.86
PDGFC-201ENST00000274071 STARD3NLO95772 234 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TTLL1O95922 423 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 EIF2S1P05198 315 aaKnown RBP9.69□□□□□ -0.86
PDGFC-201ENST00000274071 RSPH10BP0C881 870 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 NCKAP1LP55160 1127 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 NUP107P57740 925 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 MYBPC1Q00872 1141 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 APOFQ13790 326 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ARSHQ5FYA8 562 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 C6orf163Q5TEZ5 329 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 CCDC81Q6ZN84 652 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 CPSF7Q8N684 471 aaKnown RBP9.69□□□□□ -0.86
PDGFC-201ENST00000274071 BORCS5Q969J3 196 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TMIGD2Q96BF3 282 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TMEM87BQ96K49 555 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 B3GNT4Q9C0J1 378 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 PUS7LQ9H0K6 701 aaKnown RBP9.69□□□□□ -0.86
PDGFC-201ENST00000274071 GLT8D2Q9H1C3 349 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 SEMA6BQ9H3T3 888 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ARHGEF4Q9NR80 690 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ZMAT5Q9UDW3 170 aaKnown RBP9.69□□□□□ -0.86
PDGFC-201ENST00000274071 A6NL46 340 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 CIB2O75838 187 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TM7SF2O76062 418 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 FCER1AP12319 257 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 HMOX2P30519 316 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 C21orf59P57076 290 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 SNAPC2Q13487 334 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms