RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ADAM15Q13444 863 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 TRPC3Q13507 836 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 NCOA4Q13772 614 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 CTC1Q2NKJ3 1217 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 WDR72Q3MJ13 1102 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SV2CQ496J9 727 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 ZNF280DQ6N043 979 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 INTS8Q75QN2 995 aaKnown RBP7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SV2AQ7L0J3 742 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 TTC9BQ8N6N2 239 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 TRIML1Q8N9V2 468 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 STKLD1Q8NE28 680 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SLC22A17Q8WUG5 538 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 DHTKD1Q96HY7 919 aaPredicted RBP7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SRRTQ9BXP5 876 aaKnown RBP7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 MTRRQ9UBK8 725 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 PCDHB8Q9UN66 801 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 CARNS1A5YM72 827 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 M0QZQ0 153 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 MXI1P50539 228 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 PSMC1P62191 440 aaKnown RBP7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 RBP5P82980 135 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SURF1Q15526 300 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 ZNF699Q32M78 642 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 CBWD6Q4V339 395 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 COBLL1Q53SF7 1204 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 CBWD3Q5JTY5 395 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 CBWD5Q5RIA9 395 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 PDE12Q6L8Q7 609 aaKnown RBP7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SYCE2Q6PIF2 218 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 ANKS3Q6ZW76 656 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 NT5DC4Q86YG4 428 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 PDCL2Q8N4E4 241 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 ST13P5Q8NFI4 369 aaPredicted RBP7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SLC7A14Q8TBB6 771 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 BORCS6Q96GS4 357 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 LPIN3Q9BQK8 851 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 DNAJC25Q9H1X3 360 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SMYD3Q9H7B4 428 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 ARMCX3Q9UH62 379 aaPredicted RBP7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 DOCK8Q8NF50 2099 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 MYO10Q9HD67 2058 aa7.79□□□□□ -1.16
DEPDC1B-201ENST00000265036 SYCE3A1L190 88 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 SYN3O14994 580 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 HLA-DRAP01903 254 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 CDH8P55286 799 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 NLRP12P59046 1061 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 MYO1EQ12965 1108 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 KCNC3Q14003 757 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 TPD52L1Q16890 204 aaPredicted RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 ZACNQ401N2 412 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 PTCRAQ6ISU1 281 aaPredicted RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 OSTM1Q86WC4 334 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 ADGRF2Q8IZF7 708 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 KREMEN2Q8NCW0 462 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 APPL2Q8NEU8 664 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 RTP3Q9BQQ7 232 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 XYLT2Q9H1B5 865 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 ZDBF2Q9HCK1 2354 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 BICDL2A1A5D9 508 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 GRXCR2A6NFK2 248 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 CCL16O15467 120 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 HUS1O60921 280 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 C4BPAP04003 597 aaKnown RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 C8AP07357 584 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 PDGFRBP09619 1106 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 TNNC1P63316 161 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 POU5F1Q01860 360 aaKnown RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 ADCY1Q08828 1119 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 LRMPQ12912 555 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 NFIL3Q16649 462 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 SOWAHAQ2M3V2 549 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 SLC39A12Q504Y0 691 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 SASS6Q6UVJ0 657 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 RNF19BQ6ZMZ0 732 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 LRRC52Q8N7C0 313 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 ATAD1Q8NBU5 361 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 SMRP1Q8NCR6 262 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 SLC35C1Q96A29 364 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 CNOT6LQ96LI5 555 aaKnown RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 ARID3AQ99856 593 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 MRPL45Q9BRJ2 306 aaKnown RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 RHOBTB2Q9BYZ6 727 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 CRISPLD1Q9H336 500 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 CYP4F11Q9HBI6 524 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 RXFP1Q9HBX9 757 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 DDX43Q9NXZ2 648 aaKnown RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 CD207Q9UJ71 328 aa7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 USP15Q9Y4E8 981 aaPredicted RBP7.78□□□□□ -1.16
DEPDC1B-201ENST00000265036 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.77□□□□□ -1.17
DEPDC1B-201ENST00000265036 SLC16A3O15427 465 aaKnown RBP7.77□□□□□ -1.17
DEPDC1B-201ENST00000265036 ATP2C2O75185 946 aa7.77□□□□□ -1.17
DEPDC1B-201ENST00000265036 SEC24AO95486 1093 aa7.77□□□□□ -1.17
DEPDC1B-201ENST00000265036 CD58P19256 250 aa7.77□□□□□ -1.17
DEPDC1B-201ENST00000265036 LMO2P25791 158 aa7.77□□□□□ -1.17
DEPDC1B-201ENST00000265036 PNPLA4P41247 253 aa7.77□□□□□ -1.17
DEPDC1B-201ENST00000265036 NOP14P78316 857 aaKnown RBP7.77□□□□□ -1.17
DEPDC1B-201ENST00000265036 MYBPC2Q14324 1141 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms