RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 OR1G1P47890 313 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 TAF6P49848 677 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 CDR1P51861 262 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 DSC1Q08554 894 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 ZNF394Q53GI3 561 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 HGSNATQ68CP4 663 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 RAD9BQ6WBX8 426 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 LRRC52Q8N7C0 313 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 UBR7Q8N806 425 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 FAM193BQ96PV7 902 aaPredicted RBP10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 MRPL45Q9BRJ2 306 aaKnown RBP10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 BCO2Q9BYV7 579 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 HAUS4Q9H6D7 363 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 VRTNQ9H8Y1 702 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 CISHQ9NSE2 258 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 AIPL1Q9NZN9 384 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 HMGXB4Q9UGU5 601 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 PYCARDQ9ULZ3 195 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 PRG3Q9Y2Y8 225 aaPredicted RBP10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 NME7Q9Y5B8 376 aa10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 TIMM13Q9Y5L4 95 aaPredicted RBP10.43□□□□□ -0.74
SNRNP40-201ENST00000263694 B3GAT3O94766 335 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 KIF4AO95239 1232 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 RFX1P22670 979 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 TBXAS1P24557 533 aaPredicted RBP10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 HNRNPH3P31942 346 aaKnown RBP10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 RPL9P32969 192 aaKnown RBP10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 EIF4A3P38919 411 aaKnown RBP10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 KCNJ6P48051 423 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 TNNC1P63316 161 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 MEA1Q16626 185 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 SOWAHAQ2M3V2 549 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 TIGD5Q53EQ6 642 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 TMEM270Q6UE05 265 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 SLC47A2Q86VL8 602 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 FAM71AQ8IYT1 594 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 WHAMMQ8TF30 809 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 SLC20A1Q8WUM9 679 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 TRIM44Q96DX7 344 aaPredicted RBP10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 SENP8Q96LD8 212 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 ZNF560Q96MR9 790 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 TWNKQ96RR1 684 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 LBHD1Q9BQE6 289 aaPredicted RBP10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 LPIN3Q9BQK8 851 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 ZNHIT6Q9NWK9 470 aaKnown RBP10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 KANSL3Q9P2N6 904 aa10.42□□□□□ -0.74
SNRNP40-201ENST00000263694 CYB561D2O14569 222 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 NRP1O14786 923 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 HOXA2O43364 376 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 BAIAP3O94812 1187 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 STAU1O95793 577 aaKnown RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 FECHP22830 423 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 SLC11A1P49279 550 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 BCAR1P56945 870 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 PTK2Q05397 1052 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 KLHL30Q0D2K2 578 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 SV2CQ496J9 727 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 TDRD12Q587J7 1177 aaKnown RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 TAF3Q5VWG9 929 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 WSCD1Q658N2 575 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 DCLRE1AQ6PJP8 1040 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 CYP26C1Q6V0L0 522 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 ENOSF1Q7L5Y1 443 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 ZNF571Q7Z3V5 609 aaPredicted RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 NOP9Q86U38 636 aaKnown RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 OSTM1Q86WC4 334 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 DNAAF5Q86Y56 855 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 C17orf53Q8N3J3 647 aaPredicted RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 RBBP8NLQ8NC74 664 aaPredicted RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 OLIG1Q8TAK6 271 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 SYN2Q92777 582 aaPredicted RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 ZNF689Q96CS4 500 aaPredicted RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 ELOVL4Q9GZR5 314 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 NUCKS1Q9H1E3 243 aaKnown RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 NHEJ1Q9H9Q4 299 aaPredicted RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 MYO6Q9UM54 1294 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 L1RE1Q9UN81 338 aa10.41□□□□□ -0.74
SNRNP40-201ENST00000263694 EFCAB14O75071 495 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 SERPING1P05155 500 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 CFHP08603 1231 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 PDGFRBP09619 1106 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 P4HA1P13674 534 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 FERP16591 822 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 LMO2P25791 158 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 PNPLA4P41247 253 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 MAGEA10P43363 369 aaPredicted RBP10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 NDST1P52848 882 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 RAD23BP54727 409 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 C9orf50Q5SZB4 431 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 PSRC1Q6PGN9 363 aaPredicted RBP10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 DSTYKQ6XUX3 929 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 FAM43BQ6ZT52 329 aaPredicted RBP10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 TOGARAM2Q6ZUX3 1019 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 TMEM173Q86WV6 379 aaPredicted RBP10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 PDCL2Q8N4E4 241 aa10.4□□□□□ -0.74
SNRNP40-201ENST00000263694 BCL7CQ8WUZ0 217 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms