RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 F8VP50 259 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 GZMAP12544 262 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 PAX7P23759 505 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 TAS2R40P59535 323 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 GBP7Q8N8V2 638 aaPredicted RBP17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 DCLK3Q9C098 648 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 TMEM59LQ9UK28 342 aa17.08■□□□□ 0.32
PDZRN3-201ENST00000263666 H0YGN5 161 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 PECAM1P16284 738 aaPredicted RBP17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 CAP2P40123 477 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 TMPRSS15P98073 1019 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 KDSRQ06136 332 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 STAT4Q14765 748 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 RNF149Q8NC42 400 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 ATXN7L3BQ96GX2 97 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 GRHL1Q9NZI5 618 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 NFS1Q9Y697 457 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 POLR2BP30876 1174 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 CYP24A1Q07973 514 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 CLEC16AQ2KHT3 1053 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 CFAP157Q5JU67 520 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 RBM41Q96IZ5 413 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 STXBP5LQ9Y2K9 1186 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 COL4A1P02462 1669 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 NCANO14594 1321 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 RAP1GAPP47736 663 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 BMT2Q1RMZ1 405 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 EP400NLQ6ZTU2 488 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 C15orf52Q6ZUT6 534 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 SERPINB12Q96P63 405 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 TTC1Q99614 292 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 KDM4CQ9H3R0 1056 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 PARVAQ9NVD7 372 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 CFAP73A6NFT4 308 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 CIB2O75838 187 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 ARL4CP56559 192 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 SLFN11Q7Z7L1 901 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 NSUN6Q8TEA1 469 aaKnown RBP17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 FAM149B1Q96BN6 582 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 MIS12Q9H081 205 aa17.07■□□□□ 0.32
PDZRN3-201ENST00000263666 BTNL10A8MVZ5 291 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 ICAM1P05362 532 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 KRT16P08779 473 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 CYP4X1Q8N118 509 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 PLEKHO2Q8TD55 490 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 CCDC124Q96CT7 223 aaKnown RBP17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 SENP7Q9BQF6 1050 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 MOV10L1Q9BXT6 1211 aaKnown RBP17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 ZNF302Q9NR11 478 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 KCND2Q9NZV8 630 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 SMIM24O75264 130 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 CPP00450 1065 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 FASTKD3Q14CZ7 662 aaKnown RBP17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 EMC2Q15006 297 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 FAM102AQ5T9C2 384 aaPredicted RBP17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 UBA3Q8TBC4 463 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 FAM81BQ96LP2 452 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 PDCD2LQ9BRP1 358 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 IDI2Q9BXS1 227 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 IP6K2Q9UHH9 426 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 LPXNO60711 386 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 RPS12P25398 132 aaKnown RBP17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 CDH6P55285 790 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 ZNF568Q3ZCX4 644 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 CEP128Q6ZU80 1094 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 DPP9Q86TI2 863 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 FAM71AQ8IYT1 594 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 MORC4Q8TE76 937 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 ELP3Q9H9T3 547 aa17.06■□□□□ 0.32
PDZRN3-201ENST00000263666 WNT10BO00744 389 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 KRT3P12035 628 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 CHRNB2P17787 502 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 MMP13P45452 471 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 FEZF2Q8TBJ5 459 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 FAM161BQ96MY7 647 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 TRIM55Q9BYV6 548 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 ROPN1BQ9BZX4 212 aaPredicted RBP17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 ROPN1Q9HAT0 212 aaPredicted RBP17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 ZMYM2Q9UBW7 1377 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 CCDC78A2IDD5 438 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 HAUS5O94927 633 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 POLE2P56282 527 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 CUL2Q13617 745 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 CCT6BQ92526 530 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 NRBP2Q9NSY0 501 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 ZDHHC18Q9NUE0 388 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 PIH1D1Q9NWS0 290 aaKnown RBP17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 CFHP08603 1231 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 EIF3EP60228 445 aaKnown RBP17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 ACTR2P61160 394 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 PPP1R36Q96LQ0 422 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 RMDN2Q96LZ7 410 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 FAM111AQ96PZ2 611 aa17.05■□□□□ 0.32
PDZRN3-201ENST00000263666 GPATCH2LQ9NWQ4 482 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms